RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, human

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA4-205	ENST00000486360	SPG11	Q96JI7	2443 aa		12.82	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TMEM189	A5PLL7	270 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SH2D7	A6NKC9	451 aa	Predicted RBP	12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TIMM23	O14925	209 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TMEM183B	Q1AE95	376 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TMEM177	Q53S58	311 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SFRP2	Q96HF1	295 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	OR2T8	A6NH00	312 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	NPPC	P23582	126 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	LMO1	P25800	156 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	GOLT1A	Q6ZVE7	132 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SPRY4	Q9C004	299 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	MALRD1	Q5VYJ5	2156 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	CRIM1	Q9NZV1	1036 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	IGHV2-26	A0A0B4J1V2	119 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360		E7EQL1	145 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	GNLY	P22749	145 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	PSG9	Q00887	426 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	NHLH1	Q02575	133 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	WDR86	Q86TI4	376 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ZNF257	Q9Y2Q1	563 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	AUP1	Q9Y679	476 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360	WDR87	Q6ZQQ6	2873 aa		12.81	□□□□□ -0.36
PPFIA4-205	ENST00000486360		A0A1W2PNU3	283 aa	Predicted RBP	12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	HLA-DQA1	P01909	254 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	FCER1G	P30273	86 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	RPL29	P47914	159 aa	Known RBP	12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	REL	Q04864	619 aa	Predicted RBP	12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ADAMTS9	Q9P2N4	1935 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TEX50	A0A1B0GTY4	177 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	IGLV1-44	P01699	117 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TRGV3	P03979	118 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TFPI2	P48307	235 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	CCL20	P78556	96 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ICAM4	Q14773	271 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	FAM106A	Q4KMX7	169 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ZNF738	Q8NE65	137 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360		A0A0G2JRQ6	117 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	C3orf36	Q3SXR2	165 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	LINC00205	P59089	165 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	C10orf55	Q5SWW7	151 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TMEM14EP	Q6UXP3	125 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	OR10J6P	Q8NGY7	276 aa		12.8	□□□□□ -0.36
PPFIA4-205	ENST00000486360	YLPM1	P49750	1951 aa	Known RBP	12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SCO2	A0A1W2PP80	73 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	IGHV3-23	P01764	117 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	EFNA4	P52798	201 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ELOB	Q15370	118 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	OR10W1	Q8NGF6	305 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	IGHV3OR16-13	A0A075B7E8	117 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	IGHV3-74	A0A0B4J1X5	117 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ERVK11-1	P61568	191 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SPANXN1	Q5VSR9	72 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	C11orf42	Q8N5U0	333 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	HNRNPA3	P51991	378 aa	Known RBP	12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360		Q6ZRM9	215 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SLC25A33	Q9BSK2	321 aa		12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	NCOA6	Q14686	2063 aa	Predicted RBP	12.79	□□□□□ -0.36
PPFIA4-205	ENST00000486360	WIPF3	A6NGB9	483 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	CGB1	A6NKQ9	187 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	HTN1	P15515	57 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	IGFL2	Q6UWQ7	119 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	MBD3L1	Q8WWY6	194 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ZNF98	A6NK75	572 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TGFA	P01135	160 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	LYL1	P12980	280 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	DLX6	P56179	175 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TM4SF20	Q53R12	229 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SLC25A48	Q6ZT89	311 aa	Known RBP	12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ZNF383	Q8NA42	475 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TRAV3	A0A0B4J244	114 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	LYPD2	Q6UXB3	125 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	LIME1	Q9H400	295 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	VSIR	Q9H7M9	311 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	SDF2L1	Q9HCN8	221 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	PIEZO1	Q92508	2521 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	GPR183	P32249	361 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TREML4	Q6UXN2	200 aa		12.78	□□□□□ -0.36
PPFIA4-205	ENST00000486360	TRAV34	A0A0B4J273	112 aa		12.77	□□□□□ -0.36
PPFIA4-205	ENST00000486360	ZNF585B	Q52M93	769 aa		12.77	□□□□□ -0.36
PPFIA4-205	ENST00000486360	MRPL18	Q9H0U6	180 aa	Known RBP	12.77	□□□□□ -0.36
PPFIA4-205	ENST00000486360	GOLT1B	Q9Y3E0	138 aa		12.77	□□□□□ -0.36
PPFIA4-205	ENST00000486360	GATA4	P43694	442 aa		12.77	□□□□□ -0.37
PPFIA4-205	ENST00000486360	GCSAML	Q5JQS6	135 aa		12.77	□□□□□ -0.37
PPFIA4-205	ENST00000486360	IGF2-AS	Q6U949	168 aa		12.77	□□□□□ -0.37
PPFIA4-205	ENST00000486360	LY6H	O94772	140 aa		12.77	□□□□□ -0.37
PPFIA4-205	ENST00000486360	TMEM191A	Q9H0A3	160 aa		12.77	□□□□□ -0.37
PPFIA4-205	ENST00000486360	DOCK11	Q5JSL3	2073 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	NOTCH3	Q9UM47	2321 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	PEX7	O00628	323 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	AMY1A	P04745	511 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	PGLYRP4	Q96LB8	373 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	GGTLC1	Q9BX51	225 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	SIAH2	O43255	324 aa		12.76	□□□□□ -0.37
PPFIA4-205	ENST00000486360	COL8A2	P25067	703 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms