RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 PVRIGQ6DKI7 326 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 CTRB2Q6GPI1 263 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 MISP3Q96FF7 219 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 WNT10AQ9GZT5 417 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 PRDM13Q9H4Q3 707 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-207ENST00000486080 HOXA3O43365 443 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-207ENST00000486080 MDKP21741 143 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-207ENST00000486080 FGF7P21781 194 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 BLCAPP62952 87 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 C9orf152Q5JTZ5 239 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 Q6ZS46 218 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 TEX29Q8N6K0 151 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 OR5R1Q8NH85 324 aa11.37□□□□□ -0.59
COL9A1-207ENST00000486080 TAF15Q92804 592 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL9A1-207ENST00000486080 RPS10-NUDT3A0A1W2PQS6 291 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 LY6G6DO95868 133 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 FAM157CP0CG43 387 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 CD69Q07108 199 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 ECSCRQ19T08 205 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 BTNL8Q6UX41 500 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 OR5T1Q8NG75 326 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 OR2T6Q8NHC8 308 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
COL9A1-207ENST00000486080 PARD6GQ9BYG4 376 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-207ENST00000486080 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
COL9A1-207ENST00000486080 MTORP42345 2549 aa11.36□□□□□ -0.59
COL9A1-207ENST00000486080 IGHV3-21A0A0B4J1V1 117 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 CRYGCP07315 174 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 DEFA4P12838 97 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 OPRK1P41145 380 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 GAMTQ14353 236 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 EIF5AL1Q6IS14 154 aaKnown RBP11.35□□□□□ -0.59
COL9A1-207ENST00000486080 SLC16A13Q7RTY0 426 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 C16orf82Q7Z2V1 217 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 OR2G3Q8NGZ4 309 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-207ENST00000486080 MRPL36Q9P0J6 103 aaKnown RBP11.35□□□□□ -0.59
COL9A1-207ENST00000486080 WDR83OSQ9Y284 106 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 HIVEP1P15822 2718 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 BTBD17A6NE02 478 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 G3V318 75 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 M0QZK8 103 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 NMBP08949 121 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 GPX4P36969 197 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-207ENST00000486080 AKR1C1Q04828 323 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 TMEM182Q6ZP80 229 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-207ENST00000486080 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 NPVFQ9HCQ7 196 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 VPREB3Q9UKI3 123 aa11.35□□□□□ -0.59
COL9A1-207ENST00000486080 CACNG8Q8WXS5 425 aa11.34□□□□□ -0.59
COL9A1-207ENST00000486080 ACY3Q96HD9 319 aa11.34□□□□□ -0.59
COL9A1-207ENST00000486080 MGST2Q99735 147 aa11.34□□□□□ -0.59
COL9A1-207ENST00000486080 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
COL9A1-207ENST00000486080 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 MT-CO2P00403 227 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 FHITP49789 147 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 SULT1A2P50226 295 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 RAB14P61106 215 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 CLLU1Q5K131 121 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 FANCD2OSQ96PS1 177 aa11.33□□□□□ -0.6
COL9A1-207ENST00000486080 IGHG2P01859 326 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 HNF1AP20823 631 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 DEFA5Q01523 94 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-207ENST00000486080 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 I3L2K1 104 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 TEPPQ6URK8 271 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 Q71RC1 249 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-207ENST00000486080 TMEM144Q7Z5S9 345 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 CENPVQ7Z7K6 275 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-207ENST00000486080 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-207ENST00000486080 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 NOL4LQ96MY1 436 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-207ENST00000486080 HIVEP2P31629 2446 aa11.32□□□□□ -0.6
COL9A1-207ENST00000486080 ZNF705EA8MWA4 302 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-207ENST00000486080 K7EIM0 57 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 CORTO00230 105 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 SOX15O60248 233 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 CAMLGP49069 296 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 RND2P52198 227 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms