RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 MLXQ9UH92 298 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 U3KQK5 164 aa11.29□□□□□ -0.6
YIF1A-208ENST00000485820 MT-CO2P00403 227 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
YIF1A-208ENST00000485820 MFAP4P55083 255 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 SUPT4H1P63272 117 aaKnown RBP11.28□□□□□ -0.6
YIF1A-208ENST00000485820 TMEM187Q14656 261 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 TMEM268Q5VZI3 342 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 SGPP2Q8IWX5 399 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 TOMM5Q8N4H5 51 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 UBAC2Q8NBM4 344 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 WDR89Q96FK6 387 aaPredicted RBP11.28□□□□□ -0.6
YIF1A-208ENST00000485820 TXN2Q99757 166 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.28□□□□□ -0.6
YIF1A-208ENST00000485820 PRR13Q9NZ81 148 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
YIF1A-208ENST00000485820 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
YIF1A-208ENST00000485820 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
YIF1A-208ENST00000485820 NDUFA4O00483 81 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 IGHV3-48P01763 117 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 CD7P09564 240 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 RNASE2P10153 161 aaKnown RBP11.27□□□□□ -0.61
YIF1A-208ENST00000485820 AKR1C4P17516 323 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 FAUP35544 74 aaKnown RBP11.27□□□□□ -0.61
YIF1A-208ENST00000485820 SNCAP37840 140 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 AP3S2P59780 193 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 SPCS3P61009 180 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 Q56UQ5 140 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.61
YIF1A-208ENST00000485820 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 OR52E5Q8NH55 327 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 RNASE11Q8TAA1 199 aaKnown RBP11.27□□□□□ -0.61
YIF1A-208ENST00000485820 IL22RA2Q969J5 263 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 MARC2Q969Z3 335 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 PDCD10Q9BUL8 212 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 SRRQ9GZT4 340 aa11.27□□□□□ -0.61
YIF1A-208ENST00000485820 GAR1Q9NY12 217 aaKnown RBP11.27□□□□□ -0.61
YIF1A-208ENST00000485820 K7EMT4 169 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 SPANXN2Q5MJ10 180 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 DEDD2Q8WXF8 326 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 PINX1Q96BK5 328 aaKnown RBP11.26□□□□□ -0.61
YIF1A-208ENST00000485820 WWC2-AS2Q96NR7 200 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 NEURL2Q9BR09 285 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 CACNG5Q9UF02 275 aa11.26□□□□□ -0.61
YIF1A-208ENST00000485820 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
YIF1A-208ENST00000485820 CD81P60033 236 aa11.25□□□□□ -0.61
YIF1A-208ENST00000485820 BAK1Q16611 211 aa11.25□□□□□ -0.61
YIF1A-208ENST00000485820 MLANAQ16655 118 aa11.25□□□□□ -0.61
YIF1A-208ENST00000485820 GUCA2BQ16661 112 aa11.25□□□□□ -0.61
YIF1A-208ENST00000485820 BTNL8Q6UX41 500 aa11.25□□□□□ -0.61
YIF1A-208ENST00000485820 LINC00322Q6ZN03 302 aaPredicted RBP11.25□□□□□ -0.61
YIF1A-208ENST00000485820 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
YIF1A-208ENST00000485820 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
YIF1A-208ENST00000485820 C15orf62A8K5M9 175 aa11.24□□□□□ -0.61
YIF1A-208ENST00000485820 NUPL2O15504 423 aaKnown RBP11.24□□□□□ -0.61
YIF1A-208ENST00000485820 NMSQ5H8A3 153 aa11.24□□□□□ -0.61
YIF1A-208ENST00000485820 LYZL2Q7Z4W2 148 aa11.24□□□□□ -0.61
YIF1A-208ENST00000485820 SDHCQ99643 169 aaPredicted RBP11.24□□□□□ -0.61
YIF1A-208ENST00000485820 SLC25A21Q9BQT8 299 aaPredicted RBP11.24□□□□□ -0.61
YIF1A-208ENST00000485820 FNDC4Q9H6D8 234 aaPredicted RBP11.24□□□□□ -0.61
YIF1A-208ENST00000485820 ENY2Q9NPA8 101 aa11.24□□□□□ -0.61
YIF1A-208ENST00000485820 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
YIF1A-208ENST00000485820 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
YIF1A-208ENST00000485820 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 A0A0B4J2A0 478 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 CORTO00230 105 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 ZNF207O43670 478 aaKnown RBP11.23□□□□□ -0.61
YIF1A-208ENST00000485820 SCAF4O95104 1147 aaKnown RBP11.23□□□□□ -0.61
YIF1A-208ENST00000485820 TMEM50AO95807 157 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 HOXA1P49639 335 aaPredicted RBP11.23□□□□□ -0.61
YIF1A-208ENST00000485820 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
YIF1A-208ENST00000485820 HAGHQ16775 308 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 TMEM128Q5BJH2 165 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 LGI3Q8N145 548 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 DEFB125Q8N687 156 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 DUSP18Q8NEJ0 188 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 OR10C1Q96KK4 312 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 RCHY1Q96PM5 261 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 C20orf24Q9BUV8 137 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 MRPL36Q9P0J6 103 aaKnown RBP11.23□□□□□ -0.61
YIF1A-208ENST00000485820 SHPKQ9UHJ6 478 aa11.23□□□□□ -0.61
YIF1A-208ENST00000485820 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 GNG7O60262 68 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 SULT1A3P0DMM9 295 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 SULT1A4P0DMN0 295 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 HTR2BP41595 481 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 NPBWR1P48145 328 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 WFDC10AQ9H1F0 79 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms