RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PINX1Q96BK5 328 aaKnown RBP7.83□□□□□ -1.16
HMGN1-215ENST00000485550 ZNF414Q96IQ9 312 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 SEC22AQ96IW7 307 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 RNF2Q99496 336 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 TSC22D3Q99576 134 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 FUNDC2Q9BWH2 189 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 TMEM14BQ9NUH8 114 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 SMPXQ9UHP9 88 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 FAM25AB3EWG3 89 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 FAM25CB3EWG5 89 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 FAM25GB3EWG6 89 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 I3L2K1 104 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 K7EMT4 169 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 NUPL2O15504 423 aaKnown RBP7.82□□□□□ -1.16
HMGN1-215ENST00000485550 TNFAIP8O95379 198 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 MT-CO2P00403 227 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 APOA1P02647 267 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 PGAM2P15259 253 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 PI3P19957 117 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 RCVRNP35243 200 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 APOC4P55056 127 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 MFAP4P55083 255 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 ZNF124Q15973 351 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 CEMP1Q6PRD7 247 aaPredicted RBP7.82□□□□□ -1.16
HMGN1-215ENST00000485550 LYG2Q86SG7 212 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 CADM3Q8N126 398 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 GBGT1Q8N5D6 347 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 OR1P1Q8NH06 330 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 RHPN1-AS1Q9BWJ2 59 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 SCPEP1Q9HB40 452 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 KLK11Q9UBX7 282 aa7.82□□□□□ -1.16
HMGN1-215ENST00000485550 IGHV7-4-1A0A0J9YVY3 117 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 C15orf62A8K5M9 175 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 CHEK1O14757 476 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 BMI1P35226 326 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 HSPE1P61604 102 aaKnown RBP7.81□□□□□ -1.16
HMGN1-215ENST00000485550 Q6ZWC4 215 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 WFDC3Q8IUB2 231 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 STPG3Q8N7X2 389 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 TMEM116Q8NCL8 245 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 ATP6V0BQ99437 205 aa7.81□□□□□ -1.16
HMGN1-215ENST00000485550 TRAV14DV4A0A0A6YYC5 116 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 GNG7O60262 68 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 CD3DP04234 171 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 FCGR2BP31994 310 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 RORCP51449 518 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 UCP3P55916 312 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 ERHP84090 104 aaKnown RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 PRCDQ00LT1 54 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 RELQ04864 619 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 RNF183Q96D59 192 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 GALNT14Q96FL9 552 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 CMTM3Q96MX0 182 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 NXF2Q9GZY0 626 aaKnown RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 NAA50Q9GZZ1 169 aaKnown RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 MAP6D1Q9H9H5 199 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 TP53TG1Q9Y2A0 90 aa7.8□□□□□ -1.16
HMGN1-215ENST00000485550 KLK5Q9Y337 293 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-215ENST00000485550 KIR2DL5BA0A0G2JN68 375 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 KIR2DL5BA0A0G2JPC4 375 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 UBE2CO00762 179 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 IFNA17P01571 189 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 IGKV1-5P01602 117 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 APOHP02749 345 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-215ENST00000485550 ETV6P41212 452 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 PPP5CP53041 499 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 PIGPP57054 158 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 TNFRSF9Q07011 255 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 SP6Q3SY56 376 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 RNASE10Q5GAN6 216 aaKnown RBP7.79□□□□□ -1.16
HMGN1-215ENST00000485550 LGALS9CQ6DKI2 356 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 KIR2DL5AQ8N109 375 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 LILRB2Q8N423 598 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 OR52I2Q8NH67 350 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 KIR2DL5BQ8NHK3 375 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 TP53RKQ96S44 253 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 TXN2Q99757 166 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 EXTL2Q9UBQ6 330 aa7.79□□□□□ -1.16
HMGN1-215ENST00000485550 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 A0A0B4J293 547 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 SNCAP37840 140 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 AKR1C2P52895 323 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 MLANAQ16655 118 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 MZT2AQ6P582 158 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 TOMM20LQ6UXN7 152 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 TCF24Q7RTU0 167 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 ZNF114Q8NC26 417 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 DUSP18Q8NEJ0 188 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 OR4D10Q8NGI6 311 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 ST8SIA2Q92186 375 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 OR10C1Q96KK4 312 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 ABHD1Q96SE0 405 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 C6orf62Q9GZU0 229 aaPredicted RBP7.78□□□□□ -1.16
HMGN1-215ENST00000485550 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
HMGN1-215ENST00000485550 A0A0G2JRQ6 117 aa7.77□□□□□ -1.17
HMGN1-215ENST00000485550 C3orf85A0A1B0GTC6 90 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms