RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TRAV14DV4A0A0A6YYC5 116 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 KIR2DL5BA0A0G2JN68 375 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 KIR2DL5BA0A0G2JPC4 375 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 HPGDSO60760 199 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 MT-CO2P00403 227 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 SNCAP37840 140 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 TFPI2P48307 235 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 VBP1P61758 197 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 NCS1P62166 190 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 PRCDQ00LT1 54 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 RNASE10Q5GAN6 216 aaKnown RBP9.84□□□□□ -0.83
UBA3-210ENST00000485424 LYG2Q86SG7 212 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 WFDC3Q8IUB2 231 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 KIR2DL5AQ8N109 375 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 KIR2DL5BQ8NHK3 375 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 RNASE11Q8TAA1 199 aaKnown RBP9.84□□□□□ -0.83
UBA3-210ENST00000485424 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 ENY2Q9NPA8 101 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
UBA3-210ENST00000485424 IGHV3-49A0A0A0MS15 119 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 DBX1A6NMT0 343 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 M0QYG6 137 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 SCGB2A1O75556 95 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 LY6G6CO95867 125 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 IFNA17P01571 189 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 CTSGP08311 255 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 ELK1P19419 428 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 ADMP35318 185 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 NPBWR1P48145 328 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 SUB1P53999 127 aaKnown RBP eCLIP9.83□□□□□ -0.84
UBA3-210ENST00000485424 HSPE1P61604 102 aaKnown RBP9.83□□□□□ -0.84
UBA3-210ENST00000485424 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 DUSP18Q8NEJ0 188 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 ZNF486Q96H40 463 aaPredicted RBP9.83□□□□□ -0.84
UBA3-210ENST00000485424 RNF2Q99496 336 aa9.83□□□□□ -0.84
UBA3-210ENST00000485424 KLK5Q9Y337 293 aaPredicted RBP9.83□□□□□ -0.84
UBA3-210ENST00000485424 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
UBA3-210ENST00000485424 DNASE2O00115 360 aaPredicted RBP9.82□□□□□ -0.84
UBA3-210ENST00000485424 CHEK1O14757 476 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 CD5P06127 495 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 PIGPP57054 158 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 RPL11P62913 178 aaKnown RBP9.82□□□□□ -0.84
UBA3-210ENST00000485424 TNFRSF9Q07011 255 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 TRIM16LQ309B1 348 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 APRG1Q8IVJ8 170 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 CCDC71LQ8N9Z2 235 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 NXF2Q9GZY0 626 aaKnown RBP9.82□□□□□ -0.84
UBA3-210ENST00000485424 COPZ2Q9P299 210 aa9.82□□□□□ -0.84
UBA3-210ENST00000485424 I3L2K1 104 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 CORTO00230 105 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 ST8SIA3O43173 380 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
UBA3-210ENST00000485424 HOXA1P49639 335 aaPredicted RBP9.81□□□□□ -0.84
UBA3-210ENST00000485424 PPP5CP53041 499 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 SPINK9Q5DT21 86 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 GBGT1Q8N5D6 347 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 ARRDC1Q8N5I2 433 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 ZFAND1Q8TCF1 268 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 C15orf40Q8WUR7 153 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 RNF183Q96D59 192 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 TMEM231Q9H6L2 316 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 EXTL2Q9UBQ6 330 aa9.81□□□□□ -0.84
UBA3-210ENST00000485424 HERC2O95714 4834 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 AGRNO00468 2067 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 IGHV3OR16-13A0A075B7E8 117 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 IGHV3-74A0A0B4J1X5 117 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 C3orf85A0A1B0GTC6 90 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 MPTX1A8MV57 137 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 IGKV1-39P01597 117 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 IGKV1D-39P04432 117 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 PI3P19957 117 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 RND3P61587 244 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 EWSR1Q01844 656 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBA3-210ENST00000485424 SCGB2B2Q4G0G5 96 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 XP32Q5T750 250 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 ZNF600Q6ZNG1 722 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 TCF24Q7RTU0 167 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
UBA3-210ENST00000485424 NARS2Q96I59 477 aaKnown RBP9.8□□□□□ -0.84
UBA3-210ENST00000485424 OR10C1Q96KK4 312 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 CSTL1Q9H114 145 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 MAP6D1Q9H9H5 199 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 KLK11Q9UBX7 282 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 HECTD4Q9Y4D8 3996 aa9.8□□□□□ -0.84
UBA3-210ENST00000485424 ZNF182P17025 639 aaPredicted RBP9.79□□□□□ -0.84
UBA3-210ENST00000485424 TBPP20226 339 aa9.79□□□□□ -0.84
UBA3-210ENST00000485424 CEMP1Q6PRD7 247 aaPredicted RBP9.79□□□□□ -0.84
UBA3-210ENST00000485424 TP53RKQ96S44 253 aa9.79□□□□□ -0.84
UBA3-210ENST00000485424 KRTAP17-1Q9BYP8 105 aa9.79□□□□□ -0.84
UBA3-210ENST00000485424 A0A1W2PS18 150 aa9.78□□□□□ -0.84
UBA3-210ENST00000485424 RGS5O15539 181 aa9.78□□□□□ -0.84
UBA3-210ENST00000485424 CD3DP04234 171 aa9.78□□□□□ -0.84
UBA3-210ENST00000485424 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
UBA3-210ENST00000485424 OPRK1P41145 380 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms