RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CMC4P56277 68 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-205ENST00000485397 HSPE1P61604 102 aaKnown RBP14.13□□□□□ -0.15
COL27A1-205ENST00000485397 IZUMO4Q1ZYL8 232 aa14.13□□□□□ -0.15
COL27A1-205ENST00000485397 SPINK9Q5DT21 86 aa14.13□□□□□ -0.15
COL27A1-205ENST00000485397 SNX29P2Q8IUI4 249 aa14.13□□□□□ -0.15
COL27A1-205ENST00000485397 CMTM3Q96MX0 182 aa14.13□□□□□ -0.15
COL27A1-205ENST00000485397 RARRES2Q99969 163 aa14.13□□□□□ -0.15
COL27A1-205ENST00000485397 UCP3P55916 312 aa14.12□□□□□ -0.15
COL27A1-205ENST00000485397 ERHP84090 104 aaKnown RBP14.12□□□□□ -0.15
COL27A1-205ENST00000485397 TOMM20LQ6UXN7 152 aa14.12□□□□□ -0.15
COL27A1-205ENST00000485397 TCF24Q7RTU0 167 aa14.12□□□□□ -0.15
COL27A1-205ENST00000485397 LILRB2Q8N423 598 aa14.12□□□□□ -0.15
COL27A1-205ENST00000485397 ST8SIA2Q92186 375 aa14.12□□□□□ -0.15
COL27A1-205ENST00000485397 DEDDO75618 318 aa14.11□□□□□ -0.15
COL27A1-205ENST00000485397 APOHP02749 345 aaPredicted RBP14.11□□□□□ -0.15
COL27A1-205ENST00000485397 GATAD1Q8WUU5 269 aa14.11□□□□□ -0.15
COL27A1-205ENST00000485397 SCPEP1Q9HB40 452 aa14.11□□□□□ -0.15
COL27A1-205ENST00000485397 DNAH10Q8IVF4 4471 aa14.11□□□□□ -0.15
COL27A1-205ENST00000485397 IGHV3-66A0A0C4DH42 116 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 SMIM31A0A1B0GVY4 71 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 M0QYG6 137 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 APOA1P02647 267 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 RCVRNP35243 200 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 NANOS2P60321 138 aaKnown RBP14.1□□□□□ -0.15
COL27A1-205ENST00000485397 NCS1P62166 190 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 PAFAH1B2P68402 229 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 OR11H2Q8NH07 326 aa14.1□□□□□ -0.15
COL27A1-205ENST00000485397 A0A087WXM4 84 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 ST8SIA3O43173 380 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 DFFBO76075 338 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 IGKV1-5P01602 117 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 ELK1P19419 428 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 PI3P19957 117 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 DUSP18Q8NEJ0 188 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 GINS3Q9BRX5 216 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 VSIRQ9H7M9 311 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 PUS1Q9Y606 427 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL27A1-205ENST00000485397 FRAS1Q86XX4 4008 aa14.09□□□□□ -0.15
COL27A1-205ENST00000485397 HPGDSO60760 199 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 NPBWR1P48145 328 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 DEFB131AP59861 70 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 RNASE12Q5GAN4 147 aaKnown RBP14.08□□□□□ -0.16
COL27A1-205ENST00000485397 LEMD1Q68G75 181 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 FAM24BQ8N5W8 94 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 C11orf45Q8TAV5 145 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 MS4A6AQ9H2W1 248 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 ZFAND3Q9H8U3 227 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 VCX3AQ9NNX9 186 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 FBXL17Q9UF56 701 aa14.08□□□□□ -0.16
COL27A1-205ENST00000485397 A0A0B4J293 547 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 A0A1B0GU03 582 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 DNASE2O00115 360 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-205ENST00000485397 DEFB4AO15263 64 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 TMEM50AO95807 157 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 CA1P00915 261 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-205ENST00000485397 PGAM2P15259 253 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 VBP1P61758 197 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 LGALS9CQ6DKI2 356 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 ZNF600Q6ZNG1 722 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 TP53RKQ96S44 253 aa14.07□□□□□ -0.16
COL27A1-205ENST00000485397 CD5P06127 495 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 P0C879 139 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 SNCAP37840 140 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 PIGPP57054 158 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 RND3P61587 244 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
COL27A1-205ENST00000485397 SLC35G3Q8N808 338 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 FUNDC2Q9BWH2 189 aa14.06□□□□□ -0.16
COL27A1-205ENST00000485397 C11orf68Q9H3H3 251 aaKnown RBP14.06□□□□□ -0.16
COL27A1-205ENST00000485397 MRPL36Q9P0J6 103 aaKnown RBP14.06□□□□□ -0.16
COL27A1-205ENST00000485397 IFNA17P01571 189 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 RNASE2P10153 161 aaKnown RBP14.05□□□□□ -0.16
COL27A1-205ENST00000485397 ETV6P41212 452 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 AKR1C2P52895 323 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 TMEM187Q14656 261 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 RBMS2Q15434 407 aaKnown RBP14.05□□□□□ -0.16
COL27A1-205ENST00000485397 PVRIGQ6DKI7 326 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 LHFPL1Q86WI0 220 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 MFFQ9GZY8 342 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 KLK11Q9UBX7 282 aa14.05□□□□□ -0.16
COL27A1-205ENST00000485397 VPS13DQ5THJ4 4388 aa14.04□□□□□ -0.16
COL27A1-205ENST00000485397 INS-IGF2F8WCM5 200 aa14.04□□□□□ -0.16
COL27A1-205ENST00000485397 IFNA4P05014 189 aa14.04□□□□□ -0.16
COL27A1-205ENST00000485397 MLANAQ16655 118 aa14.04□□□□□ -0.16
COL27A1-205ENST00000485397 ZNF486Q96H40 463 aaPredicted RBP14.04□□□□□ -0.16
COL27A1-205ENST00000485397 FNDC4Q9H6D8 234 aaPredicted RBP14.04□□□□□ -0.16
COL27A1-205ENST00000485397 RABAC1Q9UI14 185 aa14.04□□□□□ -0.16
COL27A1-205ENST00000485397 TRAV2A0A0B4J234 112 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 C3orf85A0A1B0GTC6 90 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 FAM25AB3EWG3 89 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 FAM25CB3EWG5 89 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 FAM25GB3EWG6 89 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 CD3DP04234 171 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 PPP5CP53041 499 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 SP6Q3SY56 376 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 RNASE10Q5GAN6 216 aaKnown RBP14.03□□□□□ -0.16
COL27A1-205ENST00000485397 OR52I2Q8NH67 350 aa14.03□□□□□ -0.16
COL27A1-205ENST00000485397 A0A0G2JRQ6 117 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 TNFAIP8O95379 198 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 NPPCP23582 126 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms