RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 REG1AP05451 166 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 IGHV4-30-4P0DP06 118 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 FCGR2BP31994 310 aaPredicted RBP7.62□□□□□ -1.19
CPSF4-213ENST00000484112 CCR6P51684 374 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 SUPT4H1P63272 117 aaKnown RBP7.62□□□□□ -1.19
CPSF4-213ENST00000484112 RGS21Q2M5E4 152 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 SPSB3Q6PJ21 355 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 GPHB5Q86YW7 130 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 SLC35G3Q8N808 338 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 OR9G4Q8NGQ1 327 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 OR4C12Q96R67 309 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 TXN2Q99757 166 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 TM2D3Q9BRN9 247 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 ENY2Q9NPA8 101 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 SORL1Q92673 2214 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 ANKRD34BA5PLL1 514 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 BMPR1BO00238 502 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 ST8SIA3O43173 380 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 SULT1A3P0DMM9 295 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 SULT1A4P0DMN0 295 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 SLC25A6P12236 298 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 SNCAP37840 140 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 ATP5IP56385 69 aaPredicted RBP7.61□□□□□ -1.19
CPSF4-213ENST00000484112 IFITM3Q01628 133 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 OXA1LQ15070 435 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 FAM106AQ4KMX7 169 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 NMSQ5H8A3 153 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 PVRIGQ6DKI7 326 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 SLC25A24Q6NUK1 477 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 TMED4Q7Z7H5 227 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 NOXA1Q86UR1 476 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 LHFPL5Q8TAF8 219 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 BSCL2Q96G97 398 aaPredicted RBP7.61□□□□□ -1.19
CPSF4-213ENST00000484112 CCDC140Q96MF4 163 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 TMED3Q9Y3Q3 217 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 DMRT1Q9Y5R6 373 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
CPSF4-213ENST00000484112 A0A1B0GU03 582 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 A0A1B0GVG6 124 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 JTBO76095 146 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 SFT2D2O95562 160 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 HLA-AP01891 365 aaKnown RBP7.6□□□□□ -1.19
CPSF4-213ENST00000484112 CLEC3BP05452 202 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 ARL3P36405 182 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 HTR2BP41595 481 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 SMCO1Q147U7 214 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 OR2K2Q8NGT1 345 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 GPR146Q96CH1 333 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 C21orf62Q9NYP8 219 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 CACNG5Q9UF02 275 aa7.6□□□□□ -1.19
CPSF4-213ENST00000484112 A0A0G2JRQ6 117 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 MFSD2BA6NFX1 497 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 A8MWP6 167 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 FAM90A26D6RGX4 464 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 LYRM1O43325 122 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 TGOLN2O43493 480 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 SCGB2A1O75556 95 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 PTTG1O95997 202 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 IGLV1-51P01701 117 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 TRBV12-3P01733 135 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 VAMP1P23763 118 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 BTCP35070 178 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 HOXA1P49639 335 aaPredicted RBP7.59□□□□□ -1.19
CPSF4-213ENST00000484112 ELLP55199 621 aaPredicted RBP7.59□□□□□ -1.19
CPSF4-213ENST00000484112 SYNJ2BPP57105 145 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 BSXQ3C1V8 233 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 PLET1Q6UQ28 207 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 CLEC19AQ6UXS0 136 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 Q6ZRM9 215 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 Q8N1Y9 231 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 COQ8AQ8NI60 647 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 SCARB1Q8WTV0 552 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 MARC2Q969Z3 335 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 SPATA25Q9BR10 227 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 HIPK2Q9H2X6 1198 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 C19orf73Q9NVV2 129 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 DNAH7Q8WXX0 4024 aa7.59□□□□□ -1.19
CPSF4-213ENST00000484112 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.2
CPSF4-213ENST00000484112 STARD9Q9P2P6 4700 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 I3L2K1 104 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 K7EIM0 57 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 PLA2G10O15496 165 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 MFAP2P55001 183 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 MFAP4P55083 255 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 DEFA5Q01523 94 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 RELQ04864 619 aaPredicted RBP7.58□□□□□ -1.2
CPSF4-213ENST00000484112 PPP1R1AQ13522 171 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 IZUMO4Q1ZYL8 232 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 C2orf83Q53S99 150 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 MZT2BQ6NZ67 158 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 IL34Q6ZMJ4 242 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 C19orf35Q6ZS72 473 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 LYZL2Q7Z4W2 148 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 ZNF436Q9C0F3 470 aaPredicted RBP7.58□□□□□ -1.2
CPSF4-213ENST00000484112 TECRQ9NZ01 308 aaKnown RBP7.58□□□□□ -1.2
CPSF4-213ENST00000484112 HSPB7Q9UBY9 170 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 U3KQ87 197 aa7.58□□□□□ -1.2
CPSF4-213ENST00000484112 RPS10-NUDT3A0A1W2PQS6 291 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms