RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ANXA10Q9UJ72 324 aa5.41□□□□□ -1.54
CSDE1-206ENST00000483030 APLNQ9ULZ1 77 aa5.41□□□□□ -1.54
CSDE1-206ENST00000483030 TPRKBQ9Y3C4 175 aa5.41□□□□□ -1.54
CSDE1-206ENST00000483030 IGKV3-7A0A075B6H7 116 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 IGHV3-49A0A0A0MS15 119 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 TRAV1-2A0A0B4J238 106 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 SULT1C2O00338 296 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 CYB5BO43169 146 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 RGS10O43665 173 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 SERPINE2P07093 398 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 PTHLHP12272 177 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 RAB3BP20337 219 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 ADMP35318 185 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 PPP5CP53041 499 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 MFAP2P55001 183 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 CMC4P56277 68 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-206ENST00000483030 TCTAP57738 103 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 WT1-ASQ06250 92 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 CNPY1Q3B7I2 92 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 TOR2AQ5JU69 321 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 SPSB3Q6PJ21 355 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 ZNF773Q6PK81 442 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 GDPD1Q8N9F7 314 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 UBAC2Q8NBM4 344 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 DMBX1Q8NFW5 382 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 SCARB1Q8WTV0 552 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 RNF2Q99496 336 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 SRSF8Q9BRL6 282 aaKnown RBP5.4□□□□□ -1.54
CSDE1-206ENST00000483030 RHPN1-AS1Q9BWJ2 59 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 QTRT1Q9BXR0 403 aaKnown RBP5.4□□□□□ -1.54
CSDE1-206ENST00000483030 C11orf68Q9H3H3 251 aaKnown RBP5.4□□□□□ -1.54
CSDE1-206ENST00000483030 C21orf62Q9NYP8 219 aa5.4□□□□□ -1.54
CSDE1-206ENST00000483030 TEX50A0A1B0GTY4 177 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 SMIM30A4D0T7 59 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 C15orf62A8K5M9 175 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 CHEK1O14757 476 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 RBFOX2O43251 390 aaKnown RBP eCLIP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 MRPS14O60783 128 aaKnown RBP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 YIF1AO95070 293 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 HPRT1P00492 218 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 CA1P00915 261 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 FABP1P07148 127 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 OR4E1P0C645 316 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 TRAPPC2P0DI81 140 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 TRAPPC2BP0DI82 140 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 NQO2P16083 231 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 MYL9P24844 172 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 FCGR2CP31995 323 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 CDKN1BP46527 198 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 HOXA1P49639 335 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 EIF2B2P49770 351 aaKnown RBP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 TAS2R31P59538 309 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 POU2AF1Q16633 256 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 Q56UQ5 140 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 LINC00336Q6ZUF6 198 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 NR2C2APQ86WQ0 139 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 GBGT1Q8N5D6 347 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 GVQW1Q8N7I0 195 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-206ENST00000483030 TMEM116Q8NCL8 245 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 OR13F1Q8NGS4 319 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 HINT2Q9BX68 163 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 SLC5A7Q9GZV3 580 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 TMEM140Q9NV12 185 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 ETV7Q9Y603 341 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV3OR16-13A0A075B7E8 117 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV3-74A0A0B4J1X5 117 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV7-4-1A0A0J9YVY3 117 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 SMIM31A0A1B0GVY4 71 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 C11orf94C9JXX5 98 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 F8W036 122 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 K7EIM0 57 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 SCGB1D1O95968 90 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 FCER2P06734 321 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 CTSGP08311 255 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 MED14OSP0DP75 135 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 BCAP31P51572 246 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 FXYD4P59646 89 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 CATR1Q13166 79 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 TMEM187Q14656 261 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 MSMO1Q15800 293 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 PET117Q6UWS5 81 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 PRSS48Q7RTY5 328 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 HSD17B13Q7Z5P4 300 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-206ENST00000483030 OR1L8Q8NGR8 309 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 OR51H1Q8NH63 302 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 ZNF414Q96IQ9 312 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 PLEKHA2Q9HB19 425 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 NDUFA4L2Q9NRX3 87 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 F11RQ9Y624 299 aaKnown RBP5.38□□□□□ -1.55
CSDE1-206ENST00000483030 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
CSDE1-206ENST00000483030 TRAV14DV4A0A0A6YYC5 116 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 A0A0B4J293 547 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 TRDV1A0A1B0GX56 115 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 NUPL2O15504 423 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 NDUFS6O75380 124 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 CCNKO75909 580 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms