RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 PINX1Q96BK5 328 aaKnown RBP14.4□□□□□ -0.1
R3HDM1-215ENST00000483021 ZNF414Q96IQ9 312 aa14.4□□□□□ -0.1
R3HDM1-215ENST00000483021 HPGDSO60760 199 aa14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 ATG12O94817 140 aa14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 NPBWR1P48145 328 aa14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 RORCP51449 518 aa14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 EWSR1Q01844 656 aaKnown RBP eCLIP14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 CEMP1Q6PRD7 247 aaPredicted RBP14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 KLK5Q9Y337 293 aaPredicted RBP14.39□□□□□ -0.11
R3HDM1-215ENST00000483021 M0QYG6 137 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 LY6G6CO95867 125 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 PGAM2P15259 253 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 SNCAP37840 140 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 AKR1C2P52895 323 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 PAFAH1B2P68402 229 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 RNASE10Q5GAN6 216 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 MZT2AQ6P582 158 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 APRG1Q8IVJ8 170 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 ARRDC1Q8N5I2 433 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 AP3S1Q92572 193 aa14.38□□□□□ -0.11
R3HDM1-215ENST00000483021 IGHV3-49A0A0A0MS15 119 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 FAM25AB3EWG3 89 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 FAM25CB3EWG5 89 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 FAM25GB3EWG6 89 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 INS-IGF2F8WCM5 200 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 TBPP20226 339 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 TFPI2P48307 235 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 PIGPP57054 158 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 FAM90A2PQ658T7 463 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 LHFPL1Q86WI0 220 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 SLC35G3Q8N808 338 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 DUSP18Q8NEJ0 188 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 GATAD1Q8WUU5 269 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 PDCD10Q9BUL8 212 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 CSTL1Q9H114 145 aa14.37□□□□□ -0.11
R3HDM1-215ENST00000483021 IGKV3-7A0A075B6H7 116 aa14.36□□□□□ -0.11
R3HDM1-215ENST00000483021 MPTX1A8MV57 137 aa14.36□□□□□ -0.11
R3HDM1-215ENST00000483021 CORTO00230 105 aa14.36□□□□□ -0.11
R3HDM1-215ENST00000483021 IGHV3-48P01763 117 aa14.36□□□□□ -0.11
R3HDM1-215ENST00000483021 ZNF600Q6ZNG1 722 aa14.36□□□□□ -0.11
R3HDM1-215ENST00000483021 TCF24Q7RTU0 167 aa14.36□□□□□ -0.11
R3HDM1-215ENST00000483021 IGKV1-5P01602 117 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 SUB1P53999 127 aaKnown RBP eCLIP14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 SPINK9Q5DT21 86 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 RNASE12Q5GAN4 147 aaKnown RBP14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 TOMM20LQ6UXN7 152 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 CCDC71LQ8N9Z2 235 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 C15orf40Q8WUR7 153 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 TP53RKQ96S44 253 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 TMEM231Q9H6L2 316 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 VSIRQ9H7M9 311 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 KLK11Q9UBX7 282 aa14.35□□□□□ -0.11
R3HDM1-215ENST00000483021 IGHV3OR16-13A0A075B7E8 117 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 IGHV3-74A0A0B4J1X5 117 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 C3orf85A0A1B0GTC6 90 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 ST8SIA3O43173 380 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 IFNA17P01571 189 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 P0C879 139 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 PI3P19957 117 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 ZNF124Q15973 351 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 IZUMO4Q1ZYL8 232 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 GBGT1Q8N5D6 347 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 MTFP1Q9UDX5 166 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 FRAS1Q86XX4 4008 aa14.34□□□□□ -0.11
R3HDM1-215ENST00000483021 TRAV2A0A0B4J234 112 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 A0A0B4J293 547 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 SCGB2A1O75556 95 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 B3GALNT1O75752 331 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 DFFBO76075 338 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 CD3DP04234 171 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 TRIM16LQ309B1 348 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 PVRIGQ6DKI7 326 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 OR52I2Q8NH67 350 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 ZFAND1Q8TCF1 268 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 ST8SIA2Q92186 375 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 RARRES2Q99969 163 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 ZFAND3Q9H8U3 227 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 EXTL2Q9UBQ6 330 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 KMT2AQ03164 3969 aa14.33□□□□□ -0.12
R3HDM1-215ENST00000483021 DNASE2O00115 360 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 ZNF182P17025 639 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 HOXA1P49639 335 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 PPP5CP53041 499 aa14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 PHLDA1Q8WV24 401 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 RRNAD1Q96FB5 475 aaKnown RBP14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 C11orf68Q9H3H3 251 aaKnown RBP14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 ENY2Q9NPA8 101 aa14.32□□□□□ -0.12
R3HDM1-215ENST00000483021 A0A1W2PS18 150 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 GABARAPO95166 117 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 TMEM50AO95807 157 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 RNASE2P10153 161 aaKnown RBP14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 TAS2R19P59542 299 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 TERB2Q8NHR7 220 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 RNASE11Q8TAA1 199 aaKnown RBP14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 MFFQ9GZY8 342 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 MS4A6AQ9H2W1 248 aa14.31□□□□□ -0.12
R3HDM1-215ENST00000483021 APOHP02749 345 aaPredicted RBP14.3□□□□□ -0.12
R3HDM1-215ENST00000483021 CD74P04233 296 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms