RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 SNCAP37840 140 aa11.46□□□□□ -0.57
COL16A1-213ENST00000482910 SUB1P53999 127 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL16A1-213ENST00000482910 TRIQKQ629K1 86 aa11.46□□□□□ -0.57
COL16A1-213ENST00000482910 ZNF57Q68EA5 555 aaPredicted RBP11.46□□□□□ -0.57
COL16A1-213ENST00000482910 LGI3Q8N145 548 aa11.46□□□□□ -0.57
COL16A1-213ENST00000482910 MARC2Q969Z3 335 aa11.46□□□□□ -0.57
COL16A1-213ENST00000482910 GPR146Q96CH1 333 aa11.46□□□□□ -0.57
COL16A1-213ENST00000482910 SHPKQ9UHJ6 478 aa11.46□□□□□ -0.57
COL16A1-213ENST00000482910 DUXBA0A1W2PPF3 345 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 TMEM213A2RRL7 107 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 NHLRC4P0CG21 123 aaPredicted RBP11.45□□□□□ -0.58
COL16A1-213ENST00000482910 CBLN1P23435 193 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 INPP1P49441 399 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 HOXA1P49639 335 aaPredicted RBP11.45□□□□□ -0.58
COL16A1-213ENST00000482910 MFAP4P55083 255 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 RBMS2Q15434 407 aaKnown RBP11.45□□□□□ -0.58
COL16A1-213ENST00000482910 BAK1Q16611 211 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 DEFB114Q30KQ6 69 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 LINC00299Q6ZSB3 139 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 MISP3Q96FF7 219 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 SDHCQ99643 169 aaPredicted RBP11.45□□□□□ -0.58
COL16A1-213ENST00000482910 C7orf50Q9BRJ6 194 aaKnown RBP11.45□□□□□ -0.58
COL16A1-213ENST00000482910 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 ZC4H2Q9NQZ6 224 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
COL16A1-213ENST00000482910 ZNF320A2RRD8 509 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 NDUFA4O00483 81 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 MT-CO2P00403 227 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 C8orf88P0DMB2 117 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 SULT1A3P0DMM9 295 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 SULT1A4P0DMN0 295 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 RNASE2P10153 161 aaKnown RBP11.44□□□□□ -0.58
COL16A1-213ENST00000482910 UBE2MP61081 183 aaKnown RBP11.44□□□□□ -0.58
COL16A1-213ENST00000482910 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 NMSQ5H8A3 153 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 Q8N1Y9 231 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
COL16A1-213ENST00000482910 IGHV3-21A0A0B4J1V1 117 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 A8MZ25 164 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 NUPL2O15504 423 aaKnown RBP11.43□□□□□ -0.58
COL16A1-213ENST00000482910 CTSGP08311 255 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 ADMP35318 185 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 CCR6P51684 374 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 CD300EQ496F6 205 aaPredicted RBP11.43□□□□□ -0.58
COL16A1-213ENST00000482910 Q56UQ5 140 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 TMED4Q7Z7H5 227 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 CHRDL1Q9BU40 450 aa11.43□□□□□ -0.58
COL16A1-213ENST00000482910 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
COL16A1-213ENST00000482910 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 CENPXA8MT69 81 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 K7EMT4 169 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 HTR2BP41595 481 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 RELQ04864 619 aaPredicted RBP11.42□□□□□ -0.58
COL16A1-213ENST00000482910 SMCO1Q147U7 214 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 LYZL2Q7Z4W2 148 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 CENPSQ8N2Z9 138 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 UBAC2Q8NBM4 344 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 UXS1Q8NBZ7 420 aa11.42□□□□□ -0.58
COL16A1-213ENST00000482910 DAZ1Q9NQZ3 744 aaKnown RBP11.42□□□□□ -0.58
COL16A1-213ENST00000482910 A0A1B0GU03 582 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 NDUFB6O95139 128 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 SFT2D2O95562 160 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 SLC25A6P12236 298 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 IL7P13232 177 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 NPBWR1P48145 328 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 CNPY1Q3B7I2 92 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 TM4SF20Q53R12 229 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 DUSP18Q8NEJ0 188 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
COL16A1-213ENST00000482910 PRR13Q9NZ81 148 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 HSPB7Q9UBY9 170 aa11.41□□□□□ -0.58
COL16A1-213ENST00000482910 COL7A1Q02388 2944 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 IGHV3-35A0A0C4DH35 117 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 A6NHS1 94 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 ZNF785A8K8V0 405 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 GNG7O60262 68 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 EDN2P20800 178 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 VAMP1P23763 118 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 TNFRSF9Q07011 255 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 PPP1R1AQ13522 171 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 NOXA1Q86UR1 476 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 HEYLQ9NQ87 328 aaPredicted RBP11.4□□□□□ -0.58
COL16A1-213ENST00000482910 C19orf73Q9NVV2 129 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 MLXQ9UH92 298 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
COL16A1-213ENST00000482910 RPS10-NUDT3A0A1W2PQS6 291 aa11.39□□□□□ -0.59
COL16A1-213ENST00000482910 CEBPZOSA8MTT3 80 aa11.39□□□□□ -0.59
COL16A1-213ENST00000482910 FRMD6-AS1P0C7T7 363 aa11.39□□□□□ -0.59
COL16A1-213ENST00000482910 IGHV4-30-4P0DP06 118 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms