RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 H7C2G1 150 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 IFNA10P01566 189 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 CBR1P16152 277 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 RPS4Y1P22090 263 aaKnown RBP1.62□□□□□ -2.15
SNX27-205ENST00000482791 SRIP30626 198 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 G6PCP35575 357 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 ATP5G3P48201 142 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 EIF2B2P49770 351 aaKnown RBP1.62□□□□□ -2.15
SNX27-205ENST00000482791 CDC42P60953 191 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 RHOBP62745 196 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 HIST1H4AP62805 103 aaKnown RBP1.62□□□□□ -2.15
SNX27-205ENST00000482791 GNG3P63215 75 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 SUPT4H1P63272 117 aaKnown RBP1.62□□□□□ -2.15
SNX27-205ENST00000482791 TRIQKQ629K1 86 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 Q6Q795 121 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 LYZL1Q6UWQ5 148 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 CLVS1Q8IUQ0 354 aaPredicted RBP1.62□□□□□ -2.15
SNX27-205ENST00000482791 Q8NDZ9 215 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 OR4X2Q8NGF9 303 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 FAM172AQ8WUF8 416 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 Q9BRP9 147 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 VCX3BQ9H321 246 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 PARVBQ9HBI1 364 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 UFC1Q9Y3C8 167 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 V9GYQ6 96 aa1.62□□□□□ -2.15
SNX27-205ENST00000482791 TMSB15BA0A087X1C1 80 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 C1orf196B1AJZ1 125 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 SLC22A1O15245 554 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 MSMBP08118 114 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 PSMB8P28062 276 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 PEBP1P30086 187 aaKnown RBP1.61□□□□□ -2.15
SNX27-205ENST00000482791 NCALDP61601 193 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 GNG5P63218 68 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 ZNF90Q03938 601 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 RHEBQ15382 184 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 ZNF181Q2M3W8 571 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 ZNF791Q3KP31 576 aaPredicted RBP1.61□□□□□ -2.15
SNX27-205ENST00000482791 PABPC1L2AQ5JQF8 200 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 SPANXN3Q5MJ09 141 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 FAM27BQ5VT28 67 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 DYNAPQ8N1N2 210 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 EXOC3-AS1Q8N2X6 119 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 RPP25LQ8N5L8 163 aaKnown RBP1.61□□□□□ -2.15
SNX27-205ENST00000482791 OR13C6PQ8NH95 151 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 TERB2Q8NHR7 220 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 ANP32BQ92688 251 aaKnown RBP1.61□□□□□ -2.15
SNX27-205ENST00000482791 GPR146Q96CH1 333 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 MRPS24Q96EL2 167 aaKnown RBP1.61□□□□□ -2.15
SNX27-205ENST00000482791 GINS3Q9BRX5 216 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 MRPL40Q9NQ50 206 aaKnown RBP1.61□□□□□ -2.15
SNX27-205ENST00000482791 TVP23BQ9NYZ1 205 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 PRNDQ9UKY0 176 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 PYCARDQ9ULZ3 195 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 ERGIC3Q9Y282 383 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 MYO9BQ13459 2157 aa1.61□□□□□ -2.15
SNX27-205ENST00000482791 MPDZO75970 2070 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 MYH7BA7E2Y1 1941 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 NCKAP5O14513 1909 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 IGHV1-18A0A0C4DH31 117 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 A0A0G2JQZ4 141 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 MFSD11O43934 449 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 IGKV1-16P04430 117 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 PIGPP57054 158 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 DR1Q01658 176 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 C3orf33Q6P1S2 294 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 LCA10Q71F78 164 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 TCF24Q7RTU0 167 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 CHST6Q9GZX3 395 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 SLC39A9Q9NUM3 307 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 NDUFB11Q9NX14 153 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 AMMECR1Q9Y4X0 333 aaPredicted RBP1.6□□□□□ -2.15
SNX27-205ENST00000482791 KDM5BQ9UGL1 1544 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 KIAA2026Q5HYC2 2103 aa1.6□□□□□ -2.15
SNX27-205ENST00000482791 IGHV3-64A0A075B6Q5 118 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 G3V2T6 193 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 PGLYRP1O75594 196 aaPredicted RBP1.59□□□□□ -2.15
SNX27-205ENST00000482791 CASP1P29466 404 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 AQP4P55087 323 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 ERHP84090 104 aaKnown RBP1.59□□□□□ -2.15
SNX27-205ENST00000482791 RELAQ04206 551 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 TPRXLQ17RH7 258 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 LINC01554Q52M75 96 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 LRRC28Q86X40 367 aaPredicted RBP1.59□□□□□ -2.15
SNX27-205ENST00000482791 PFN4Q8NHR9 129 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 DNAJC30Q96LL9 226 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 C2orf50Q96LR7 162 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 SCGB3A1Q96QR1 104 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 PCBD2Q9H0N5 130 aa1.59□□□□□ -2.15
SNX27-205ENST00000482791 COL4A2P08572 1712 aa1.59□□□□□ -2.16
SNX27-205ENST00000482791 ADGRB3O60242 1522 aa1.59□□□□□ -2.16
SNX27-205ENST00000482791 TOPBP1Q92547 1522 aa1.59□□□□□ -2.16
SNX27-205ENST00000482791 SYNMO15061 1565 aa1.59□□□□□ -2.16
SNX27-205ENST00000482791 KIF24Q5T7B8 1368 aa1.59□□□□□ -2.16
SNX27-205ENST00000482791 TRBV19A0A075B6N1 114 aa1.58□□□□□ -2.16
SNX27-205ENST00000482791 TRGV4A0A0C4DH28 118 aa1.58□□□□□ -2.16
SNX27-205ENST00000482791 A0A0D9SEW6 157 aa1.58□□□□□ -2.16
SNX27-205ENST00000482791 TRBV10-2A0A0K0K1G8 114 aa1.58□□□□□ -2.16
SNX27-205ENST00000482791 H0YJX3 145 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms