RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 GPX4P36969 197 aaPredicted RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 RPL27AP46776 148 aaKnown RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 RAB5CP51148 216 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 HBG1P69891 147 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 HBG2P69892 147 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 CTAG1AP78358 180 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 SERF2P84101 59 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 KRTAP1-1Q07627 177 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 PMS2P11Q13670 270 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 C19orf54Q5BKX5 351 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 FAM120AOSQ5T036 256 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 CTRB2Q6GPI1 263 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 EIF5AL1Q6IS14 154 aaKnown RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 ALKAL2Q6UX46 152 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 SLC24A4Q8NFF2 622 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 OR10P1Q8NGE3 313 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 OR10W1Q8NGF6 305 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 RNASEH2CQ8TDP1 164 aaKnown RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 TAF15Q92804 592 aaKnown RBP eCLIP4.99□□□□□ -1.61
NCK1-208ENST00000482071 GNPNAT1Q96EK6 184 aaPredicted RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 Q96MF0 132 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 P2RX4Q99571 388 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 SCRT1Q9BWW7 348 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 COMMD5Q9GZQ3 224 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 HEYLQ9NQ87 328 aaPredicted RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 METTL1Q9UBP6 276 aaKnown RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 ZNF580Q9UK33 172 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 AKAP9Q99996 3911 aa4.99□□□□□ -1.61
NCK1-208ENST00000482071 ANK3Q12955 4377 aaKnown RBP4.99□□□□□ -1.61
NCK1-208ENST00000482071 ZFHX3Q15911 3703 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 SVEP1Q4LDE5 3571 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 A0A1W2PRD5 423 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 A0A1W2PRF3 423 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 A0A1W2PRM7 423 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 A6NDX4 124 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 UMAD1C9J7I0 102 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 TRIM77I1YAP6 450 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 MPDU1O75352 247 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 CA2P00918 260 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 NPY1RP25929 384 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 PAX6P26367 422 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 MFAP2P55001 183 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 RAB11AP62491 216 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 ERHP84090 104 aaKnown RBP4.98□□□□□ -1.61
NCK1-208ENST00000482071 CD69Q07108 199 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 SLC38A11Q08AI6 406 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 TMEM267Q0VDI3 215 aaPredicted RBP4.98□□□□□ -1.61
NCK1-208ENST00000482071 C10orf55Q5SWW7 151 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 ASPHD1Q5U4P2 390 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 CYB5R2Q6BCY4 276 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 BTNL8Q6UX41 500 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 C16orf82Q7Z2V1 217 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 TMEM217Q8N7C4 229 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 TMED6Q8WW62 240 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 SRSF12Q8WXF0 261 aaKnown RBP4.98□□□□□ -1.61
NCK1-208ENST00000482071 CCDC140Q96MF4 163 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 RBM14Q96PK6 669 aaKnown RBP4.98□□□□□ -1.61
NCK1-208ENST00000482071 TMEM147Q9BVK8 224 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 SMIM3Q9BZL3 60 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 FBXL15Q9H469 300 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 PLEKHA3Q9HB20 300 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 NPVFQ9HCQ7 196 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 PARP11Q9NR21 331 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 UQCC1Q9NVA1 299 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 C1RLQ9NZP8 487 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 NUP50Q9UKX7 468 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 DMRT1Q9Y5R6 373 aa4.98□□□□□ -1.61
NCK1-208ENST00000482071 CSMD1Q96PZ7 3565 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 IGHV7-81A0A0B4J1V7 117 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 TRAV1-1A0A0B4J248 108 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 TRAV40A0A0B4J280 105 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 A0A0U1RQK1 487 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 NPIPB5A8MRT5 1133 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 RBMXL2O75526 392 aaKnown RBP4.97□□□□□ -1.61
NCK1-208ENST00000482071 TSPAN9O75954 239 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 TGFAP01135 160 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 IFNA10P01566 189 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 FBP1P09467 338 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 TMEM11P17152 192 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 CD24P25063 80 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 CX3CL1P78423 397 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 MMDQ15546 238 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 SPINK9Q5DT21 86 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 RUSC1-AS1Q66K80 236 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 DPPA3Q6W0C5 159 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 TMEM144Q7Z5S9 345 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 PDZD9Q8IXQ8 264 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 CIARTQ8N365 385 aaPredicted RBP4.97□□□□□ -1.61
NCK1-208ENST00000482071 TTC9CQ8N5M4 171 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 C5orf56Q8N8D9 126 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 THAP8Q8NA92 274 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 WFDC11Q8NEX6 87 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 NUDT10Q8NFP7 164 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 OR1P1Q8NH06 330 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 MBD3L1Q8WWY6 194 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 ANAPC16Q96DE5 110 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
NCK1-208ENST00000482071 CLCC1Q96S66 551 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms