RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CHRNB4P30926 498 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 OR5I1Q13606 314 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 OR10W1Q8NGF6 305 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 OR1L4Q8NGR5 311 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM167AQ8TBQ9 72 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF503Q96F45 646 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 C2orf88Q9BSF0 95 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 SAP30LQ9HAJ7 183 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PPIAL4AQ9Y536 164 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 GRIFINA4D1Z8 144 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 SNURFLB1AK76 121 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 ISLRO14498 428 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 NDUFB3O43676 98 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 SUMO1P63165 101 aaKnown RBP12.48□□□□□ -0.41
C9orf3-218ENST00000482056 ADIPOQQ15848 244 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-218ENST00000482056 LRRC10Q5BKY1 277 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 C22orf34Q6ZV56 151 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 ASCL5Q7RTU5 278 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 BAGE3Q86Y29 109 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 OR8I2Q8N0Y5 310 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 C8orf31Q8N9H6 132 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 DNAJC4Q9NNZ3 241 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 ICE1Q9Y2F5 2266 aa12.48□□□□□ -0.41
C9orf3-218ENST00000482056 COX7A2P2O60397 106 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 CCL3L1P16619 93 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 TAS2R60P59551 318 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 BPIFB3P59826 476 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 UBE2L3P68036 154 aaKnown RBP12.47□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM200BQ69YZ2 307 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 TNCP24821 2201 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 A0A1B0GUS0 222 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 A0A1B0GV90 55 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF705FA8MVS1 300 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-218ENST00000482056 GGTLC3B5MD39 225 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF705DP0CH99 300 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF705BP0CI00 300 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-218ENST00000482056 PPOXP50336 477 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 CX3CL1P78423 397 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 Q0VG73 95 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 C1orf194Q5T5A4 169 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 DOLPP1Q86YN1 238 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF430Q9H8G1 570 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-218ENST00000482056 WASHC3Q9Y3C0 194 aa12.47□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM178BH3BS89 294 aa12.46□□□□□ -0.41
C9orf3-218ENST00000482056 NUPR1O60356 82 aa12.46□□□□□ -0.41
C9orf3-218ENST00000482056 MLANAQ16655 118 aa12.46□□□□□ -0.41
C9orf3-218ENST00000482056 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
C9orf3-218ENST00000482056 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 DPRXA6NFQ7 191 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 SERF1AO75920 110 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
C9orf3-218ENST00000482056 BSPH1Q075Z2 132 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
C9orf3-218ENST00000482056 C10orf113Q5VZT2 155 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 OR2T6Q8NHC8 308 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 SLC25A2Q9BXI2 301 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 Q9UFV3 132 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 NAT8BQ9UHF3 227 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-218ENST00000482056 KLK10O43240 276 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 REG1BP48304 166 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 OR5AU1Q8NGC0 362 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
C9orf3-218ENST00000482056 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
C9orf3-218ENST00000482056 TCRBV4S1A1TA0A5B7 111 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 PSMB11A5LHX3 300 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 K7EM74 188 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 MC5RP33032 325 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 TBX15Q96SF7 602 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 PAXXQ9BUH6 204 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 CDC42EP3Q9UKI2 254 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 POLR3KQ9Y2Y1 108 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-218ENST00000482056 LOC400499M0QZD8 3231 aa12.44□□□□□ -0.42
C9orf3-218ENST00000482056 KIR2DL5BA0A0G2JN68 375 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 KIR2DL5BA0A0G2JPC4 375 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 HLA-DQA1P01909 254 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 AMY1AP04745 511 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 COL8A2P25067 703 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 FXYD3Q14802 87 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 ETFRF1Q6IPR1 90 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 TGIF2LXQ8IUE1 241 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 KIR2DL5AQ8N109 375 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 CCL17Q92583 94 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 TP53TG3Q9ULZ0 132 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 CNOT1A5YKK6 2376 aaKnown RBP12.43□□□□□ -0.42
C9orf3-218ENST00000482056 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
C9orf3-218ENST00000482056 SIGLECL1Q8N7X8 197 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms