RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZNF705AQ6ZN79 300 aaPredicted RBP15.72■□□□□ 0.11
CCM2-214ENST00000481194 SIGLEC9Q9Y336 463 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 LOC102723971A0A1B0GUV8 181 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 FNDC10F2Z333 226 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 RIGQ13278 110 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 CYB561D1Q8N8Q1 229 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 MYO7BQ6PIF6 2116 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 TMEM250H0YL14 139 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 EAF1Q96JC9 268 aaPredicted RBP15.72■□□□□ 0.11
CCM2-214ENST00000481194 TMEM208Q9BTX3 173 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 DCAF16Q9NXF7 216 aa15.72■□□□□ 0.11
CCM2-214ENST00000481194 HIST1H2BAQ96A08 127 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 FAM210BQ96KR6 192 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 IGHV1-69DA0A0B4J2H0 117 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 IGHV1-69P01742 117 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 TMEM14EPQ6UXP3 125 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 DTX2Q86UW9 622 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 ZNF738Q8NE65 137 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 APC2O95996 2303 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 SAA4P35542 130 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 ZNF600Q6ZNG1 722 aa15.71■□□□□ 0.11
CCM2-214ENST00000481194 TP53BP1Q12888 1972 aaPredicted RBP15.71■□□□□ 0.11
CCM2-214ENST00000481194 PARD6GQ9BYG4 376 aaPredicted RBP15.71■□□□□ 0.1
CCM2-214ENST00000481194 ESPL1Q14674 2120 aa15.71■□□□□ 0.1
CCM2-214ENST00000481194 GPR183P32249 361 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 TM4SF20Q53R12 229 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 UFC1Q9Y3C8 167 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 C7orf77A4D0Y5 90 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 IGHV2-5P01817 119 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 PEMTQ9UBM1 199 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 FBLL1A6NHQ2 334 aaKnown RBP15.7■□□□□ 0.1
CCM2-214ENST00000481194 ZNF137PP52743 207 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 WISP2O76076 250 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 PRNTQ86SH4 94 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 RHOGP84095 191 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 CLEC5AQ9NY25 188 aa15.7■□□□□ 0.1
CCM2-214ENST00000481194 EML5Q05BV3 1969 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 ZNF585BQ52M93 769 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 WFDC3Q8IUB2 231 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 NAGKQ9UJ70 344 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 NDUFB4O95168 129 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 C5orf24Q7Z6I8 188 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 MYOD1P15172 320 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 RPS20P60866 119 aaKnown RBP15.69■□□□□ 0.1
CCM2-214ENST00000481194 SNRPD3P62318 126 aaKnown RBP15.69■□□□□ 0.1
CCM2-214ENST00000481194 CLEC19AQ6UXS0 136 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 OR5AN1Q8NGI8 311 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 FAM103A1Q9BTL3 118 aaKnown RBP15.69■□□□□ 0.1
CCM2-214ENST00000481194 CD24P25063 80 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 ZNF586Q9NXT0 402 aa15.69■□□□□ 0.1
CCM2-214ENST00000481194 RNF223E7ERA6 249 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 NIT2Q9NQR4 276 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 NAT8BQ9UHF3 227 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 H3BUX3 64 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 C2CD4CQ8TF44 421 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 WIPF3A6NGB9 483 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 HAX1O00165 279 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 C5orf17Q8NAS9 161 aa15.68■□□□□ 0.1
CCM2-214ENST00000481194 ORM1P02763 201 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 DUX4L9Q6RFH8 374 aaPredicted RBP15.67■□□□□ 0.1
CCM2-214ENST00000481194 F11RQ9Y624 299 aaKnown RBP15.67■□□□□ 0.1
CCM2-214ENST00000481194 IGKV3-7A0A075B6H7 116 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 VENTXO95231 258 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 TSPOP30536 169 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 SIGLECL1Q8N7X8 197 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 TMEM18Q96B42 140 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 IGHV3-48P01763 117 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 Q96MF0 132 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 PF4P02776 101 aa15.67■□□□□ 0.1
CCM2-214ENST00000481194 PRB1P04280 392 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 SPSB3Q6PJ21 355 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 FAM223BA6NKX1 122 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 FAM223AQ8IWN6 122 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 A8MWL6 223 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 NBEAP1P0C6P0 100 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 TRGV9Q99603 122 aa15.66■□□□□ 0.1
CCM2-214ENST00000481194 H0Y8G0 127 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 SCO1O75880 301 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 CACNA1BQ00975 2339 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 FCN1O00602 326 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 RNF212Q495C1 297 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 SAPCD1Q5SSQ6 148 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 RNF125Q96EQ8 232 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 USMG5Q96IX5 58 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 HLA-DRB1P01911 266 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 BRD3OSQ6XYD6 125 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 OR10W1Q8NGF6 305 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 TRBV7-1A0A0A6YYK4 115 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 IGHV3-23P01764 117 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 GUCA2BQ16661 112 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 FAM24BQ8N5W8 94 aa15.65■□□□□ 0.1
CCM2-214ENST00000481194 ISLRO14498 428 aa15.64■□□□□ 0.1
CCM2-214ENST00000481194 PAX6P26367 422 aa15.64■□□□□ 0.1
CCM2-214ENST00000481194 TRAV3A0A0B4J244 114 aa15.64■□□□□ 0.09
CCM2-214ENST00000481194 HOXA4Q00056 320 aaPredicted RBP15.64■□□□□ 0.09
CCM2-214ENST00000481194 FHITP49789 147 aa15.64■□□□□ 0.09
CCM2-214ENST00000481194 GAMTQ14353 236 aa15.64■□□□□ 0.09
CCM2-214ENST00000481194 DEFB113Q30KQ7 82 aa15.64■□□□□ 0.09
CCM2-214ENST00000481194 TREML4Q6UXN2 200 aa15.64■□□□□ 0.09
CCM2-214ENST00000481194 WFDC1Q9HC57 220 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms