RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PTPRSQ13332 1948 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 FMN1Q68DA7 1419 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 TRGV5A0A0B4J1U4 118 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 A0A0J9YX75 114 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 ZNF73O43830 326 aaPredicted RBP2.88□□□□□ -1.95
COPA-203ENST00000481040 CREBL2O60519 120 aaPredicted RBP2.88□□□□□ -1.95
COPA-203ENST00000481040 NBEAP1P0C6P0 100 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 RPS4Y1P22090 263 aaKnown RBP2.88□□□□□ -1.95
COPA-203ENST00000481040 SRIP30626 198 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 RPL28P46779 137 aaKnown RBP2.88□□□□□ -1.95
COPA-203ENST00000481040 FOXF1Q12946 379 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 TMEM78Q5T7P6 136 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 ZNF561Q8N587 486 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 FAM24BQ8N5W8 94 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 SERPINI1Q99574 410 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 ZNF471Q9BX82 626 aaPredicted RBP2.88□□□□□ -1.95
COPA-203ENST00000481040 RNF122Q9H9V4 155 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 SLC39A9Q9NUM3 307 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 NAT8Q9UHE5 227 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 MYH11P35749 1972 aa2.88□□□□□ -1.95
COPA-203ENST00000481040 CEP350Q5VT06 3117 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 SLX4Q8IY92 1834 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 MAP1LC3B2A6NCE7 125 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 G3V3Q6 166 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 TSTD3H0UI37 97 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 BANF1O75531 89 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 MSMBP08118 114 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 EVX1P49640 407 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 TPI1P60174 286 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 BAMBIQ13145 260 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 KISS1Q15726 138 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 DCUN1D2Q6PH85 259 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 LHFPL1Q86WI0 220 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 TERB2Q8NHR7 220 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 MALSU1Q96EH3 234 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 PKMYT1Q99640 499 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 TM2D3Q9BRN9 247 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 IMUPQ9GZP8 106 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 MAP1LC3BQ9GZQ8 125 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 PBOV1Q9GZY1 135 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 WDR90Q96KV7 1748 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 SCN9AQ15858 1988 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 TONSLQ96HA7 1378 aa2.87□□□□□ -1.95
COPA-203ENST00000481040 S100A4P26447 101 aaKnown RBP2.86□□□□□ -1.95
COPA-203ENST00000481040 PSMB8P28062 276 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 SCGB2B2Q4G0G5 96 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 Q6ZS52 159 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 BPIFA4PQ86YQ2 179 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 DYNAPQ8N1N2 210 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 OR52R1Q8NGF1 315 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 OR51T1Q8NGJ9 327 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 OR4C16Q8NGL9 310 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 DNAJC9Q8WXX5 260 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 C8orf4Q9NR00 106 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 BATF3Q9NR55 127 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 ERGIC3Q9Y282 383 aa2.86□□□□□ -1.95
COPA-203ENST00000481040 ECM29Q5VYK3 1845 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 KIF13AQ9H1H9 1805 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 A0A1W2PNN7 141 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 RIIAD1A6NNX1 92 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 ORC5O43913 435 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 CSN2P05814 226 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 PSMD8P48556 350 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 SLC35E3Q7Z769 313 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 CLVS1Q8IUQ0 354 aaPredicted RBP2.85□□□□□ -1.95
COPA-203ENST00000481040 OR13D1Q8NGV5 346 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 GRPEL2Q8TAA5 225 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 TIMM9Q9Y5J7 89 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 GREB1Q4ZG55 1949 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 HEATR5AQ86XA9 2040 aa2.85□□□□□ -1.95
COPA-203ENST00000481040 NACADO15069 1562 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 IGLV10-54A0A075B6I4 117 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 TRAV7A0A075B6U4 112 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 C1orf196B1AJZ1 125 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 SLC22A1O15245 554 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 CYB5BO43169 146 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 PFDN1O60925 122 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 APOA2P02652 100 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 PRB2P02812 416 aaPredicted RBP2.84□□□□□ -1.95
COPA-203ENST00000481040 CTSGP08311 255 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 S100GP29377 79 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 ARPC4P59998 168 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 YPEL3P61236 119 aaPredicted RBP2.84□□□□□ -1.95
COPA-203ENST00000481040 LINC01554Q52M75 96 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 LYZL1Q6UWQ5 148 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 MIR17HGQ75NE6 70 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 TRAPPC6BQ86SZ2 158 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 DYDC1Q8WWB3 177 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 PLEKHB2Q96CS7 222 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 TUBA4BQ9H853 241 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 HHLA3Q9XRX5 114 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 ARHGAP32A7KAX9 2087 aa2.84□□□□□ -1.95
COPA-203ENST00000481040 FHAD1B1AJZ9 1412 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms