RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CRYM-AS1A6NIL9 109 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 IFNA17P01571 189 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 FCGR2BP31994 310 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-209ENST00000480900 ADMP35318 185 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 DHODHQ02127 395 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 BTNL8Q6UX41 500 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 UBAC2Q8NBM4 344 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 GLYATL2Q8WU03 294 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 TXN2Q99757 166 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 PDCD10Q9BUL8 212 aa12.8□□□□□ -0.36
HSPG2-209ENST00000480900 RBM38Q9H0Z9 239 aaKnown RBP12.8□□□□□ -0.36
HSPG2-209ENST00000480900 DAZ1Q9NQZ3 744 aaKnown RBP12.8□□□□□ -0.36
HSPG2-209ENST00000480900 HUWE1Q7Z6Z7 4374 aaKnown RBP12.8□□□□□ -0.36
HSPG2-209ENST00000480900 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 A0A0G2JRQ6 117 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 ZNF701M0R085 212 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-209ENST00000480900 CD7P09564 240 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 SNCAP37840 140 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 MFAP4P55083 255 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 AARDQ4LEZ3 155 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 SPINK9Q5DT21 86 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 LHFPL5Q8TAF8 219 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 RBPMSQ93062 196 aaKnown RBP12.79□□□□□ -0.36
HSPG2-209ENST00000480900 SCGB3A2Q96PL1 93 aa12.79□□□□□ -0.36
HSPG2-209ENST00000480900 MT-CO2P00403 227 aa12.78□□□□□ -0.36
HSPG2-209ENST00000480900 CTSGP08311 255 aa12.78□□□□□ -0.36
HSPG2-209ENST00000480900 RELQ04864 619 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-209ENST00000480900 HAGHQ16775 308 aa12.78□□□□□ -0.36
HSPG2-209ENST00000480900 SLC16A13Q7RTY0 426 aa12.78□□□□□ -0.36
HSPG2-209ENST00000480900 MCUBQ9NWR8 336 aa12.78□□□□□ -0.36
HSPG2-209ENST00000480900 K7EMT4 169 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 NUPL2O15504 423 aaKnown RBP12.77□□□□□ -0.37
HSPG2-209ENST00000480900 S100A5P33763 92 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 FAUP35544 74 aaKnown RBP12.77□□□□□ -0.37
HSPG2-209ENST00000480900 ETV6P41212 452 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 HOXA1P49639 335 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-209ENST00000480900 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
HSPG2-209ENST00000480900 ANKRD55Q3KP44 614 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 PVRIGQ6DKI7 326 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 Q6ZRM9 215 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 SELENOHQ8IZQ5 122 aaKnown RBP12.77□□□□□ -0.37
HSPG2-209ENST00000480900 TRIM63Q969Q1 353 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 GALNT14Q96FL9 552 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 SPATA25Q9BR10 227 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 ENY2Q9NPA8 101 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-209ENST00000480900 SELENOKQ9Y6D0 94 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 TMEM56-RWDD3S4R434 201 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 V9GYH0 126 aa12.77□□□□□ -0.37
HSPG2-209ENST00000480900 C15orf62A8K5M9 175 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 CORTO00230 105 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
HSPG2-209ENST00000480900 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
HSPG2-209ENST00000480900 AP3S2P59780 193 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 SPCS3P61009 180 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 KLF9Q13886 244 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-209ENST00000480900 PYDC2Q56P42 97 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 TMEM268Q5VZI3 342 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 LINC00322Q6ZN03 302 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-209ENST00000480900 RBPMS2Q6ZRY4 209 aaKnown RBP12.76□□□□□ -0.37
HSPG2-209ENST00000480900 OR52E5Q8NH55 327 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 IL22RA2Q969J5 263 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
HSPG2-209ENST00000480900 C20orf24Q9BUV8 137 aa12.76□□□□□ -0.37
HSPG2-209ENST00000480900 GNG7O60262 68 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 NPBWR1P48145 328 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 ZNF79Q15937 498 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 DEFB125Q8N687 156 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 OR52B4Q8NGK2 314 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 GPR146Q96CH1 333 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 ZNF414Q96IQ9 312 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 SPAG8Q99932 426 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-209ENST00000480900 WFDC10AQ9H1F0 79 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 SRD5A3Q9H8P0 318 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 CACNG5Q9UF02 275 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 KCNIP3Q9Y2W7 256 aa12.75□□□□□ -0.37
HSPG2-209ENST00000480900 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 IGHV3-48P01763 117 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 TMEM187Q14656 261 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 BSXQ3C1V8 233 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 CCDC190Q86UF4 302 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 DEDD2Q8WXF8 326 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 OR10C1Q96KK4 312 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 CITED4Q96RK1 184 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 CACFD1Q9UGQ2 172 aa12.74□□□□□ -0.37
HSPG2-209ENST00000480900 RBMY1BA6NDE4 496 aaKnown RBP12.73□□□□□ -0.37
HSPG2-209ENST00000480900 RBMY1EA6NEQ0 496 aaKnown RBP12.73□□□□□ -0.37
HSPG2-209ENST00000480900 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
HSPG2-209ENST00000480900 TSPAN4O14817 238 aa12.73□□□□□ -0.37
HSPG2-209ENST00000480900 RBMY1DP0C7P1 496 aaKnown RBP12.73□□□□□ -0.37
HSPG2-209ENST00000480900 LAMTOR1Q6IAA8 161 aa12.73□□□□□ -0.37
HSPG2-209ENST00000480900 A0A0B4J2A0 478 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
HSPG2-209ENST00000480900 YIF1AO95070 293 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 AKR1C4P17516 323 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 HTR2BP41595 481 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms