RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 KIAA1671Q9BY89 1806 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
COL20A1-206ENST00000479501 NTF4P34130 210 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 CA7P43166 264 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 KLRB1Q12918 225 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 OR10AG1Q8NH19 301 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 KCNS1Q96KK3 526 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 NEU1Q99519 415 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 IL36BQ9NZH7 164 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
COL20A1-206ENST00000479501 LIPFP07098 398 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 ZNF841Q6ZN19 808 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 NIT1Q86X76 327 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 HIST3H2BBQ8N257 126 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 TIMP3P35625 211 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 Q6ZS49 121 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
COL20A1-206ENST00000479501 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 SNCGO76070 127 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 DUTP33316 252 aaKnown RBP11.94□□□□□ -0.5
COL20A1-206ENST00000479501 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 PYY3Q5JQD4 70 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 ZNF502Q8TBZ5 544 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 M0QZ24 198 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 GOSR1O95249 250 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 CCL3L1P16619 93 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 PNKDQ8N490 385 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL20A1-206ENST00000479501 SERF1AO75920 110 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 TWIST1Q15672 202 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 OR51G1Q8NGK1 321 aa11.94□□□□□ -0.5
COL20A1-206ENST00000479501 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 J3KRW8 73 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-206ENST00000479501 MBNL2Q5VZF2 373 aaKnown RBP11.93□□□□□ -0.5
COL20A1-206ENST00000479501 Q6P435 159 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 FAM19A2Q8N3H0 131 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 GRAMD2BQ96HH9 432 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 ATP5G3P48201 142 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 M0R3E3 92 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
COL20A1-206ENST00000479501 ANAPC10Q9UM13 185 aa11.93□□□□□ -0.5
COL20A1-206ENST00000479501 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
COL20A1-206ENST00000479501 TMEM238LA0A1B0GVL6 79 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 A6NJY4 79 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 CXCL1P09341 107 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 MRPL20Q9BYC9 149 aaKnown RBP11.92□□□□□ -0.5
COL20A1-206ENST00000479501 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 IGFBP2P18065 325 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 RNF138Q8WVD3 245 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 ALKBH7Q9BT30 221 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-206ENST00000479501 IGHV1-46P01743 117 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 ST6GALNAC6Q969X2 333 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 IGKV1-5P01602 117 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 SELLP14151 372 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 NRN1Q9NPD7 142 aa11.92□□□□□ -0.5
COL20A1-206ENST00000479501 TRBV24-1A0A075B6N3 115 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 LYL1P12980 280 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 C20orf204Q6ZNR8 217 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 HIST1H4GQ99525 98 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 AMBPP02760 352 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 DNLZQ5SXM8 178 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 FAM106CPP0CH98 169 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
COL20A1-206ENST00000479501 MLNRO43193 412 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 MGPP08493 103 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 HBBP68871 147 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 TCF23Q7RTU1 214 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
COL20A1-206ENST00000479501 WIPF3A6NGB9 483 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 CGAP01215 116 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 GPX4P36969 197 aaPredicted RBP11.9□□□□□ -0.5
COL20A1-206ENST00000479501 OR1N2Q8NGR9 330 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 A1L4Q6 167 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 MBD3L4A6NDZ8 208 aaPredicted RBP11.9□□□□□ -0.5
COL20A1-206ENST00000479501 MBD3L3A6NE82 208 aaPredicted RBP11.9□□□□□ -0.5
COL20A1-206ENST00000479501 MBD3L5A6NJ08 208 aaPredicted RBP11.9□□□□□ -0.5
COL20A1-206ENST00000479501 SNAI2O43623 268 aa11.9□□□□□ -0.5
COL20A1-206ENST00000479501 MBD3L2Q8NHZ7 208 aaPredicted RBP11.9□□□□□ -0.5
COL20A1-206ENST00000479501 H3BTX0 84 aa11.9□□□□□ -0.51
COL20A1-206ENST00000479501 IGKV3-15P01624 115 aa11.9□□□□□ -0.51
COL20A1-206ENST00000479501 OR9G9P0C7N8 305 aa11.9□□□□□ -0.51
COL20A1-206ENST00000479501 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.51
COL20A1-206ENST00000479501 SPACA3Q8IXA5 215 aa11.9□□□□□ -0.51
COL20A1-206ENST00000479501 CD177Q8N6Q3 437 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms