RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 IL34Q6ZMJ4 242 aa11.82□□□□□ -0.52
C9orf3-217ENST00000479161 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-217ENST00000479161 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
C9orf3-217ENST00000479161 I3L2K1 104 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 LYRM1O43325 122 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 IGLV1-51P01701 117 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 ARL3P36405 182 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 SYNJ2BPP57105 145 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 SMCO1Q147U7 214 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 CLEC19AQ6UXS0 136 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 SCARB1Q8WTV0 552 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 ENY2Q9NPA8 101 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
C9orf3-217ENST00000479161 A8MWP6 167 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 PITX3O75364 302 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 SAP30O75446 220 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 VAMP1P23763 118 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 HTR2BP41595 481 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 ELLP55199 621 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-217ENST00000479161 PPP1R1AQ13522 171 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 NOXA1Q86UR1 476 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 OR2K2Q8NGT1 345 aa11.8□□□□□ -0.52
C9orf3-217ENST00000479161 ZNF436Q9C0F3 470 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-217ENST00000479161 C9orf170A2RU37 121 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 F8W735 103 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-217ENST00000479161 TGOLN2O43493 480 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 PFDN1O60925 122 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 CSN3P07498 182 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 RNASE2P10153 161 aaKnown RBP11.79□□□□□ -0.52
C9orf3-217ENST00000479161 MFAP4P55083 255 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 TNFRSF9Q07011 255 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 ANKRD55Q3KP44 614 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 C2orf83Q53S99 150 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
C9orf3-217ENST00000479161 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-217ENST00000479161 PPP5D1E7EU14 171 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 OR2C1O95371 312 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 LY86O95711 162 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 OR4E1P0C645 316 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 HOXA1P49639 335 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-217ENST00000479161 DHRS2Q13268 280 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 LYG2Q86SG7 212 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 MARC2Q969Z3 335 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 HIPK2Q9H2X6 1198 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 U3KQ87 197 aa11.78□□□□□ -0.52
C9orf3-217ENST00000479161 K7EIL1 84 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 MT-CO2P00403 227 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 TCRBP04435 133 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 GPR183P32249 361 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 ASAH1Q13510 395 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 RGS21Q2M5E4 152 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 COQ8AQ8NI60 647 aa11.77□□□□□ -0.53
C9orf3-217ENST00000479161 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.53
C9orf3-217ENST00000479161 HEYLQ9NQ87 328 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-217ENST00000479161 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
C9orf3-217ENST00000479161 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 K7EMT4 169 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 NDUFA4O00483 81 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 UPK1BO75841 260 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 CTSGP08311 255 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 NPBWR1P48145 328 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 MZT2BQ6NZ67 158 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 DUSP18Q8NEJ0 188 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 MRAPQ8TCY5 172 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 MISP3Q96FF7 219 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 PRR13Q9NZ81 148 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 FLVCR2Q9UPI3 526 aa11.76□□□□□ -0.53
C9orf3-217ENST00000479161 LSM4Q9Y4Z0 139 aaKnown RBP11.76□□□□□ -0.53
C9orf3-217ENST00000479161 C2orf70A6NJV1 201 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 CEBPZOSA8MTT3 80 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 NUPL2O15504 423 aaKnown RBP11.75□□□□□ -0.53
C9orf3-217ENST00000479161 MED6O75586 246 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 PRB2P02812 416 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-217ENST00000479161 ADMP35318 185 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 RELQ04864 619 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-217ENST00000479161 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 SLC24A4Q8NFF2 622 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 MITD1Q8WV92 249 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 UFC1Q9Y3C8 167 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 S4R3C0 116 aa11.75□□□□□ -0.53
C9orf3-217ENST00000479161 RPS10-NUDT3A0A1W2PQS6 291 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 TMEM213A2RRL7 107 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 OR2T8A6NH00 312 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 SLC25A4P12235 298 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 FOLR2P14207 255 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 SPNP16150 400 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 CBLN1P23435 193 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 LCN12Q6JVE5 192 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 ADAMTSL5Q6ZMM2 481 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 OR1S1Q8NH92 325 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 DTD1Q8TEA8 209 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms