RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
VIM-204ENST00000478746 FAM24BQ8N5W8 94 aa12.39□□□□□ -0.43
VIM-204ENST00000478746 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
VIM-204ENST00000478746 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
VIM-204ENST00000478746 TXN2Q99757 166 aa12.39□□□□□ -0.43
VIM-204ENST00000478746 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
VIM-204ENST00000478746 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
VIM-204ENST00000478746 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 NOTOA8MTQ0 251 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 PPYP01298 95 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 IFNA10P01566 189 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 SPP1P10451 314 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 PTHLHP12272 177 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 CLVS1Q8IUQ0 354 aaPredicted RBP12.38□□□□□ -0.43
VIM-204ENST00000478746 LILRB2Q8N423 598 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 BEST4Q8NFU0 473 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 SLC25A46Q96AG3 418 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 GINS3Q9BRX5 216 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 RNF167Q9H6Y7 350 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 COMMD9Q9P000 198 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 CELA1Q9UNI1 258 aa12.38□□□□□ -0.43
VIM-204ENST00000478746 IGLV2-18A0A075B6J9 118 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 NOL3O60936 208 aaKnown RBP12.37□□□□□ -0.43
VIM-204ENST00000478746 IFNA21P01568 189 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 IFNA17P01571 189 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
VIM-204ENST00000478746 NPY1RP25929 384 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 FXYD4P59646 89 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
VIM-204ENST00000478746 TPRA1Q86W33 373 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 OR1P1Q8NH06 330 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 MISP3Q96FF7 219 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 TMEM56Q96MV1 263 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 NAA50Q9GZZ1 169 aaKnown RBP12.37□□□□□ -0.43
VIM-204ENST00000478746 VSIRQ9H7M9 311 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 TBC1D24Q9ULP9 559 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 NSG2Q9Y328 171 aa12.37□□□□□ -0.43
VIM-204ENST00000478746 IGHV3-66A0A0C4DH42 116 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 SNAPC5O75971 98 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 GABARAPO95166 117 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 SDC2P34741 201 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 AADACL3Q5VUY0 350 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 ZNF818PQ6ZRF7 136 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 TMEM14BQ9NUH8 114 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 CLEC5AQ9NY25 188 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 DAPK2Q9UIK4 370 aa12.36□□□□□ -0.43
VIM-204ENST00000478746 I3L2K1 104 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 GNG7O60262 68 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 IGHV3-48P01763 117 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 C4BPBP20851 252 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 VBP1P61758 197 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 NCS1P62166 190 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 MXD1Q05195 221 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 TOMM20LQ6UXN7 152 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 Q6ZR54 194 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 HOGA1Q86XE5 327 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 UBE2DNLQ8IWF7 75 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 RAB2BQ8WUD1 216 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 RHBDL2Q9NX52 303 aa12.35□□□□□ -0.43
VIM-204ENST00000478746 TRAV18A0A075B6X5 111 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 CCDC160A6NGH7 325 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 KNCNA6PVL3 124 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 KRASP01116 189 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 TGFBR1P36897 503 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 TMBIM6P55061 237 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 CTF1Q16619 201 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 CSNK1G2-AS1Q8NCQ2 148 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 LGALS14Q8TCE9 139 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 BCL7BQ9BQE9 202 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 FKBP11Q9NYL4 201 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 PRNDQ9UKY0 176 aa12.34□□□□□ -0.43
VIM-204ENST00000478746 MT-CO2P00403 227 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 CLEC2LP0C7M8 214 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 F2RP25116 425 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 G6PCP35575 357 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 LPAR6P43657 344 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 C1orf134Q5TEV5 83 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 Q6ZRM9 215 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 TMEM17Q86X19 198 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 CADM3Q8N126 398 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 MAPKAPK5-AS1Q8N8E1 139 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 TMEM231Q9H6L2 316 aa12.33□□□□□ -0.44
VIM-204ENST00000478746 K7EQG2 157 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 CDK2AP2O75956 126 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 CD74P04233 296 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 SFXN4Q6P4A7 337 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 STXBP6Q8NFX7 210 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 BORCS5Q969J3 196 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 PINX1Q96BK5 328 aaKnown RBP12.32□□□□□ -0.44
VIM-204ENST00000478746 MOB3AQ96BX8 217 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
VIM-204ENST00000478746 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
VIM-204ENST00000478746 FCER2P06734 321 aa12.31□□□□□ -0.44
VIM-204ENST00000478746 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
VIM-204ENST00000478746 NPPCP23582 126 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms