RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 GFI1Q99684 422 aa8.3□□□□□ -1.08
HDAC8-217ENST00000478743 FGF20Q9NP95 211 aaPredicted RBP8.3□□□□□ -1.08
HDAC8-217ENST00000478743 MRPS18AQ9NVS2 196 aaKnown RBP8.3□□□□□ -1.08
HDAC8-217ENST00000478743 NSG2Q9Y328 171 aa8.3□□□□□ -1.08
HDAC8-217ENST00000478743 IGLV5-52A0A0A0MRZ9 124 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 A0A0J9YY99 117 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 ZNF705GA8MUZ8 300 aaPredicted RBP8.29□□□□□ -1.08
HDAC8-217ENST00000478743 BPNT1O95861 308 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 HLA-DQB1P01920 261 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 DCKP27707 260 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 HNRNPA3P51991 378 aaKnown RBP8.29□□□□□ -1.08
HDAC8-217ENST00000478743 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 ZNF114Q8NC26 417 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 Q96MT0 163 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 HSD17B10Q99714 261 aaKnown RBP8.29□□□□□ -1.08
HDAC8-217ENST00000478743 DCSTAMPQ9H295 470 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 NDUFA4L2Q9NRX3 87 aa8.29□□□□□ -1.08
HDAC8-217ENST00000478743 ELF5Q9UKW6 265 aaPredicted RBP8.29□□□□□ -1.08
HDAC8-217ENST00000478743 DBX1A6NMT0 343 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 ATP5G1P05496 136 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 CRYBB3P26998 211 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 ATP5G3P48201 142 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 POU2AF1Q16633 256 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 RBM48Q5RL73 367 aaKnown RBP8.28□□□□□ -1.08
HDAC8-217ENST00000478743 ZNF600Q6ZNG1 722 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 SPAG16Q8N0X2 631 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 GLMPQ8WWB7 406 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 LSM10Q969L4 123 aaKnown RBP8.28□□□□□ -1.08
HDAC8-217ENST00000478743 C7orf50Q9BRJ6 194 aaKnown RBP8.28□□□□□ -1.08
HDAC8-217ENST00000478743 URM1Q9BTM9 101 aaKnown RBP8.28□□□□□ -1.08
HDAC8-217ENST00000478743 POMPQ9Y244 141 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 GOLT1BQ9Y3E0 138 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 OR2W1Q9Y3N9 320 aa8.28□□□□□ -1.08
HDAC8-217ENST00000478743 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 SNTNA6NMZ2 147 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 LYRM9A8MSI8 78 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 ATP8B1O43520 1251 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 NPPCP23582 126 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 CLDN12P56749 244 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 TMPRSS11AQ6ZMR5 421 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 PINX1Q96BK5 328 aaKnown RBP8.27□□□□□ -1.09
HDAC8-217ENST00000478743 TXN2Q99757 166 aa8.27□□□□□ -1.09
HDAC8-217ENST00000478743 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
HDAC8-217ENST00000478743 SULT1C2O00338 296 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 AZU1P20160 251 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 TTC23Q5W5X9 447 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 THOC7Q6I9Y2 204 aaKnown RBP8.26□□□□□ -1.09
HDAC8-217ENST00000478743 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 OR1P1Q8NH06 330 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 RHOXF1Q8NHV9 184 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 MOB3AQ96BX8 217 aa8.26□□□□□ -1.09
HDAC8-217ENST00000478743 A0A075B6Q4 140 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 F6UB75 175 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 MFNGO00587 321 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 ALPLP05186 524 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 TAS2R31P59538 309 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 ODF1Q14990 250 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 Q6ZSA8 131 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 PQLC1Q8N2U9 271 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 OR4B1Q8NGF8 309 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 GNPNAT1Q96EK6 184 aaPredicted RBP8.25□□□□□ -1.09
HDAC8-217ENST00000478743 CCL28Q9NRJ3 127 aa8.25□□□□□ -1.09
HDAC8-217ENST00000478743 A0A1W2PS18 150 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 EBAG9O00559 213 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 EI24O14681 340 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 NQO2P16083 231 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 HOXA5P20719 270 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 LELP1Q5T871 98 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 HSD17B13Q7Z5P4 300 aaPredicted RBP8.24□□□□□ -1.09
HDAC8-217ENST00000478743 DMBX1Q8NFW5 382 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 OR4C16Q8NGL9 310 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 METTL26Q96S19 204 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 MAGT1Q9H0U3 335 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 SAV1Q9H4B6 383 aaPredicted RBP8.24□□□□□ -1.09
HDAC8-217ENST00000478743 OR51B2Q9Y5P1 312 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 U3KQE9 123 aa8.24□□□□□ -1.09
HDAC8-217ENST00000478743 CBY3A6NI87 242 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 WBP4O75554 376 aaKnown RBP8.23□□□□□ -1.09
HDAC8-217ENST00000478743 TMEM50AO95807 157 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 NKX2-1P43699 371 aaPredicted RBP8.23□□□□□ -1.09
HDAC8-217ENST00000478743 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
HDAC8-217ENST00000478743 MRPS15P82914 257 aaKnown RBP8.23□□□□□ -1.09
HDAC8-217ENST00000478743 OR5I1Q13606 314 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 ZNF79Q15937 498 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 KCTD21Q4G0X4 260 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 OR56B1Q8NGI3 324 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 FAM212BQ9NTI7 297 aaPredicted RBP8.23□□□□□ -1.09
HDAC8-217ENST00000478743 LPAP08519 4548 aa8.23□□□□□ -1.09
HDAC8-217ENST00000478743 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
HDAC8-217ENST00000478743 SIVA1O15304 175 aa8.22□□□□□ -1.09
HDAC8-217ENST00000478743 DENRO43583 198 aaKnown RBP8.22□□□□□ -1.09
HDAC8-217ENST00000478743 RORCP51449 518 aa8.22□□□□□ -1.09
HDAC8-217ENST00000478743 Q6ZS49 121 aa8.22□□□□□ -1.09
HDAC8-217ENST00000478743 RAB3CQ96E17 227 aa8.22□□□□□ -1.09
HDAC8-217ENST00000478743 TMEM272A0A1B0GTI8 110 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 ZNF701M0R085 212 aaPredicted RBP8.21□□□□□ -1.1
HDAC8-217ENST00000478743 SLC17A2O00624 439 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms