RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 UPK1BO75841 260 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 DUS4LO95620 317 aaKnown RBP5.3□□□□□ -1.56
BRCA1-215ENST00000478531 HOXB5P09067 269 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 OR4E1P0C645 316 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 ZP3P21754 424 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 SNCAP37840 140 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 MFAP2P55001 183 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 SYNJ2BPP57105 145 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 UBE2MP61081 183 aaKnown RBP5.3□□□□□ -1.56
BRCA1-215ENST00000478531 ERHP84090 104 aaKnown RBP5.3□□□□□ -1.56
BRCA1-215ENST00000478531 BEAN1Q3B7T3 259 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 OR2C3Q8N628 320 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 UBAC2Q8NBM4 344 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 PINX1Q96BK5 328 aaKnown RBP5.3□□□□□ -1.56
BRCA1-215ENST00000478531 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
BRCA1-215ENST00000478531 COL7A1Q02388 2944 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.29□□□□□ -1.56
BRCA1-215ENST00000478531 FAM240BA0A1B0GVZ2 78 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 C9orf170A2RU37 121 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 OR2T8A6NH00 312 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 TCRBP04435 133 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 GPR183P32249 361 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 ARL3P36405 182 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 SPCS3P61009 180 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 DHRS2Q13268 280 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 ASAH1Q13510 395 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 SMCO1Q147U7 214 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 MAJINQ3KP22 176 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 NMSQ5H8A3 153 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 OR52B4Q8NGK2 314 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 OR1P1Q8NH06 330 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 OR1S1Q8NH92 325 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 ENKURQ8TC29 256 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 CXorf58Q96LI9 332 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 GPR61Q9BZJ8 451 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 HEYLQ9NQ87 328 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-215ENST00000478531 TRBV7-1A0A0A6YYK4 115 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 PIGBOS1A0A0B4J2F0 54 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 IGHV3-35A0A0C4DH35 117 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 DUXBA0A1W2PPF3 345 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 IGHV3-48P01763 117 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 C9orf66Q5T8R8 295 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 C11orf87Q6NUJ2 197 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 LYG2Q86SG7 212 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 HAPLN4Q86UW8 402 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 ZNF114Q8NC26 417 aa5.29□□□□□ -1.56
BRCA1-215ENST00000478531 K7EIM0 57 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 TSC22D2O75157 780 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 GGCTO75223 188 aaKnown RBP5.28□□□□□ -1.56
BRCA1-215ENST00000478531 ADAP1O75689 374 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 OR2C1O95371 312 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 MT-CO2P00403 227 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 CLEC3BP05452 202 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 KRTAP10-11P60412 298 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 IFITM3Q01628 133 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 TNFRSF9Q07011 255 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 KLF5Q13887 457 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-215ENST00000478531 AARDQ4LEZ3 155 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 Q56UQ5 140 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 GGNBP1Q5YKI7 109 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 LRTM2Q8N967 370 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 OR1L6Q8NGR2 347 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 COQ8AQ8NI60 647 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 ZNF502Q8TBZ5 544 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 SCARB1Q8WTV0 552 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 ELOVL1Q9BW60 279 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 RBKSQ9H477 322 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 C21orf62Q9NYP8 219 aa5.28□□□□□ -1.56
BRCA1-215ENST00000478531 A0A1B0GU03 582 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF320A2RRD8 509 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 S100A6P06703 90 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 H2AFB2P0C5Z0 115 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 RNASE2P10153 161 aaKnown RBP5.27□□□□□ -1.57
BRCA1-215ENST00000478531 OPRK1P41145 380 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 SUB1P53999 127 aaKnown RBP eCLIP5.27□□□□□ -1.57
BRCA1-215ENST00000478531 KLK9Q2XQG4 91 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 FAM209BQ5JX69 171 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 KPRPQ5T749 579 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-215ENST00000478531 ACSM6Q6P461 480 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 PLET1Q6UQ28 207 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 UXS1Q8NBZ7 420 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 OR9G4Q8NGQ1 327 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 OR52E5Q8NH55 327 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 VN1R17PQ8TDU5 208 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 DTD1Q8TEA8 209 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 OR4C12Q96R67 309 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 SEC22CQ9BRL7 303 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 HIPK2Q9H2X6 1198 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 AURKAIP1Q9NWT8 199 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-215ENST00000478531 HSPB7Q9UBY9 170 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 KLK9Q9UKQ9 250 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 TMED3Q9Y3Q3 217 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 MPTX1A8MV57 137 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 INS-IGF2F8WCM5 200 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 I3L2K1 104 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 TGOLN2O43493 480 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 LY86O95711 162 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 IFNA10P01566 189 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 IFNA21P01568 189 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms