RNA–Protein interactions for RNA: ENST00000478189.1

HLA-DPB1-215, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-215ENST00000478189 TMEM190Q8WZ59 177 aa13.29□□□□□ -0.28
HLA-DPB1-215ENST00000478189 RRNAD1Q96FB5 475 aaKnown RBP13.29□□□□□ -0.28
HLA-DPB1-215ENST00000478189 MISP3Q96FF7 219 aa13.29□□□□□ -0.28
HLA-DPB1-215ENST00000478189 MLXQ9UH92 298 aa13.29□□□□□ -0.28
HLA-DPB1-215ENST00000478189 ZNF785A8K8V0 405 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 C8orf88P0DMB2 117 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 FCGR2BP31994 310 aaPredicted RBP13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 FAUP35544 74 aaKnown RBP13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 AP3S2P59780 193 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 SGPP2Q8IWX5 399 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 IL22RA2Q969J5 263 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 GPR146Q96CH1 333 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 C19orf73Q9NVV2 129 aa13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 TECRQ9NZ01 308 aaKnown RBP13.28□□□□□ -0.28
HLA-DPB1-215ENST00000478189 KMT2CQ8NEZ4 4911 aaKnown RBP13.27□□□□□ -0.28
HLA-DPB1-215ENST00000478189 A8MZ25 164 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 MT-CO2P00403 227 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 IFNA17P01571 189 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CTSGP08311 255 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 RNASE2P10153 161 aaKnown RBP13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 BSXQ3C1V8 233 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SPANXN2Q5MJ10 180 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 UBAC2Q8NBM4 344 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 RNASE11Q8TAA1 199 aaKnown RBP13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 DEDD2Q8WXF8 326 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 WDR89Q96FK6 387 aaPredicted RBP13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SCGB3A2Q96PL1 93 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SDHCQ99643 169 aaPredicted RBP13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CACNG5Q9UF02 275 aa13.27□□□□□ -0.29
HLA-DPB1-215ENST00000478189 IGHV3-48P01763 117 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 AKR1C4P17516 323 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 HOXA1P49639 335 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ELLP55199 621 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 BAK1Q16611 211 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 Q56UQ5 140 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 TMEM61Q8N0U2 210 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 OR52E5Q8NH55 327 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 PDCD10Q9BUL8 212 aa13.26□□□□□ -0.29
HLA-DPB1-215ENST00000478189 NDUFA4O00483 81 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SPCS3P61009 180 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 NMSQ5H8A3 153 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 BTNL8Q6UX41 500 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 GTSCR1Q86UQ5 136 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 UFC1Q9Y3C8 167 aa13.25□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CD7P09564 240 aa13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 MFAP4P55083 255 aa13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 MARC2Q969Z3 335 aa13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 TXN2Q99757 166 aa13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 DAZ1Q9NQZ3 744 aaKnown RBP13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 MRPL27Q9P0M9 148 aaKnown RBP13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 U3KQK5 164 aa13.24□□□□□ -0.29
HLA-DPB1-215ENST00000478189 IGHV3OR16-8A0A075B7F1 116 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 A0A0B4J2A0 478 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SNCAP37840 140 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CD81P60033 236 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ZNF57Q68EA5 555 aaPredicted RBP13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 TMED4Q7Z7H5 227 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 NEURL2Q9BR09 285 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 WFDC10AQ9H1F0 79 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 FNDC4Q9H6D8 234 aaPredicted RBP13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 GAR1Q9NY12 217 aaKnown RBP13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 MRPL36Q9P0J6 103 aaKnown RBP13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SHPKQ9UHJ6 478 aa13.23□□□□□ -0.29
HLA-DPB1-215ENST00000478189 NXPH3O95157 252 aa13.22□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SULT1A3P0DMM9 295 aa13.22□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SULT1A4P0DMN0 295 aa13.22□□□□□ -0.29
HLA-DPB1-215ENST00000478189 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SLC25A21Q9BQT8 299 aaPredicted RBP13.22□□□□□ -0.29
HLA-DPB1-215ENST00000478189 TM2D3Q9BRN9 247 aa13.22□□□□□ -0.29
HLA-DPB1-215ENST00000478189 C15orf62A8K5M9 175 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 K7EMT4 169 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CORTO00230 105 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ANXA3P12429 323 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 CCR6P51684 374 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 SRPXP78539 464 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 GUCA2BQ16661 112 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ANKRD55Q3KP44 614 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 TMEM128Q5BJH2 165 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 LGI3Q8N145 548 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
HLA-DPB1-215ENST00000478189 ZNF207O43670 478 aaKnown RBP13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 GNG7O60262 68 aa13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 SCAF4O95104 1147 aaKnown RBP13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 BTCP35070 178 aa13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 SUB1P53999 127 aaKnown RBP eCLIP13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 RBMS2Q15434 407 aaKnown RBP13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
HLA-DPB1-215ENST00000478189 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms