RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 OR4C12Q96R67 309 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 KLK15Q9H2R5 256 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 MBD2Q9UBB5 411 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
VHL-203ENST00000477538 RPLP1P05386 114 aaKnown RBP12.61□□□□□ -0.39
VHL-203ENST00000477538 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 RAB9AP51151 201 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 RAB11AP62491 216 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 RHOGP84095 191 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 RNF152Q8N8N0 203 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 ST6GAL2Q96JF0 529 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 THYN1Q9P016 225 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 FBXL7Q9UJT9 491 aa12.61□□□□□ -0.39
VHL-203ENST00000477538 FAM223BA6NKX1 122 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 CORTO00230 105 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 NDUFB8O95169 186 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 IFNA4P05014 189 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 CD28P10747 220 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 CAV2P51636 162 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 Q5BKY6 102 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 TCTEX1D4Q5JR98 221 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 FAM223AQ8IWN6 122 aa12.6□□□□□ -0.39
VHL-203ENST00000477538 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
VHL-203ENST00000477538 LYRM2Q9NU23 88 aaPredicted RBP12.6□□□□□ -0.39
VHL-203ENST00000477538 FAM24AA6NFZ4 105 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 G3V3Q6 166 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 LYL1P12980 280 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 P2RY1P47900 373 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 KRTAP10-3P60369 221 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 EXOSC2Q13868 293 aaKnown RBP12.59□□□□□ -0.39
VHL-203ENST00000477538 C15orf32Q32M92 178 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 TMEM14EPQ6UXP3 125 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 C11orf44Q8N8P7 122 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 MYOZ3Q8TDC0 251 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
VHL-203ENST00000477538 DCUN1D4Q92564 292 aa12.59□□□□□ -0.39
VHL-203ENST00000477538 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 A0A0G2JLM5 398 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 IGSF23A1L1A6 192 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 OPRK1P41145 380 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 ATP5G2Q06055 141 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 TCTE3Q8IZS6 198 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 USMG5Q96IX5 58 aa12.58□□□□□ -0.4
VHL-203ENST00000477538 FBN1P35555 2871 aaKnown RBP12.58□□□□□ -0.4
VHL-203ENST00000477538 FXYD6-FXYD2A0A087WZ82 144 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 IGHV3-21A0A0B4J1V1 117 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 TCRBV4S1A1TA0A5B7 111 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 MFSD2BA6NFX1 497 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 I3L2K1 104 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 K7EIM0 57 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 MT-CO2P00403 227 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 SLC25A4P12235 298 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 KIAA0141Q14154 515 aaPredicted RBP12.57□□□□□ -0.4
VHL-203ENST00000477538 HIST2H2BDQ6DRA6 164 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 OR8G2PQ6IF36 304 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 STX12Q86Y82 276 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 TMEM252Q8N6L7 170 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 ZNF491Q8N8L2 437 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 CXorf58Q96LI9 332 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 SLC25A31Q9H0C2 315 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
VHL-203ENST00000477538 COL6A5A8TX70 2615 aa12.57□□□□□ -0.4
VHL-203ENST00000477538 TENM1Q9UKZ4 2725 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 PMS2P5A8MQ11 134 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 PRSS46E5RG02 174 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 CST7O76096 145 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 IGHV3-11P01762 117 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 SULT1A1P50225 295 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 CD69Q07108 199 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 C12orf54Q6X4T0 127 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 OR10P1Q8NGE3 313 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 VN1R17PQ8TDU5 208 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 SCARB1Q8WTV0 552 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 EEF1AKMT3Q96AZ1 226 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 UBE2E2Q96LR5 201 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 CITED2Q99967 270 aaPredicted RBP12.56□□□□□ -0.4
VHL-203ENST00000477538 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
VHL-203ENST00000477538 S4R3C0 116 aa12.56□□□□□ -0.4
VHL-203ENST00000477538 SCAF4O95104 1147 aaKnown RBP12.55□□□□□ -0.4
VHL-203ENST00000477538 IGHV3-48P01763 117 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 IGHV3-23P01764 117 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
VHL-203ENST00000477538 CDX1P47902 265 aaPredicted RBP12.55□□□□□ -0.4
VHL-203ENST00000477538 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.4
VHL-203ENST00000477538 CD300CQ08708 224 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 MLANAQ16655 118 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 SLC16A13Q7RTY0 426 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 HAPLN4Q86UW8 402 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 NEURL2Q9BR09 285 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms