RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ELOA3CA0A087WX78 387 aaPredicted RBP4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 NOTOA8MTQ0 251 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 RTL8CO15255 209 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 IFNA21P01568 189 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 IFNA17P01571 189 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 CD5P06127 495 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 SPP1P10451 314 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 C4BPBP20851 252 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 F2RP25116 425 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 EMP1P54849 157 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 MSMO1Q15800 293 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 TBCEQ15813 527 aaPredicted RBP4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 SPINK9Q5DT21 86 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 UBE2UQ5VVX9 321 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 FAM90A2PQ658T7 463 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 MORN3Q6PF18 240 aaPredicted RBP4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 TOMM20LQ6UXN7 152 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 HOGA1Q86XE5 327 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 POM121L12Q8N7R1 296 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 DUSP18Q8NEJ0 188 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 OR1P1Q8NH06 330 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 OR4A16Q8NH70 328 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 FCAMRQ8WWV6 532 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF414Q96IQ9 312 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 OR10C1Q96KK4 312 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 CNBD2Q96M20 576 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 ATP6V0BQ99437 205 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF2Q9BSG1 426 aaPredicted RBP4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 RNF126Q9BV68 326 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM14BQ9NUH8 114 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 FKBP11Q9NYL4 201 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 PRNDQ9UKY0 176 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 CELA1Q9UNI1 258 aa4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 PUS1Q9Y606 427 aaKnown RBP eCLIP4.84□□□□□ -1.63
RTFDC1-206ENST00000477485 DBX1A6NMT0 343 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 I3L2K1 104 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 PMP2P02689 132 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 AMBPP02760 352 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 HTN3P15516 51 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 NPY1RP25929 384 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 PSMB9P28065 219 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 S100GP29377 79 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 GNRHRP30968 328 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 ERHP84090 104 aaKnown RBP4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 PHLDA2Q53GA4 152 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 TMEM41BQ5BJD5 291 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 SOHLH1Q5JUK2 328 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 IDNKQ5T6J7 187 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 SFXN4Q6P4A7 337 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 H2BFWTQ7Z2G1 175 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 TRPT1Q86TN4 253 aaKnown RBP4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 CMTM1Q8IZ96 169 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 LILRB2Q8N423 598 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 OR5AP2Q8NGF4 316 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 NARS2Q96I59 477 aaKnown RBP4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 METTL26Q96S19 204 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 TSC22D3Q99576 134 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 TXN2Q99757 166 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 SCRT1Q9BWW7 348 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 DIABLOQ9NR28 239 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 TXNL4BQ9NX01 149 aaKnown RBP4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 BLOC1S6Q9UL45 172 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 X6R8D5 127 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 NACAE9PAV3 2078 aa4.83□□□□□ -1.64
RTFDC1-206ENST00000477485 IGHV3OR16-12A0A075B7B8 117 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 A0A1W2PS18 150 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 ZNF705EA8MWA4 302 aaPredicted RBP4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 PGLYRP1O75594 196 aaPredicted RBP4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 FGF2P09038 288 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 NPPCP23582 126 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 SNCAP37840 140 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 CBX5P45973 191 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 P2RY1P47900 373 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 NPBWR1P48145 328 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 RFX2P48378 723 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 TNP2Q05952 138 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 C12orf74Q32Q52 190 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 PSMG4Q5JS54 123 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 ZNF600Q6ZNG1 722 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 SLC35G3Q8N808 338 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 OR5H6Q8NGV6 325 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 OR5H2Q8NGV7 314 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 TMEM230Q96A57 120 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 PDCD10Q9BUL8 212 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 VSIRQ9H7M9 311 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 AUNIPQ9H7T9 357 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 SSR3Q9UNL2 185 aa4.82□□□□□ -1.64
RTFDC1-206ENST00000477485 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 TRAV2A0A0B4J234 112 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 LOC100506127A0A0U1RQW1 187 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 HELTA6NFD8 242 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 ANKRD65E5RJM6 399 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 K7EQG2 157 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 GPR31O00270 319 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 SCGB2A1O75556 95 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 IGKV3-20P01619 116 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 GIG44P09565 113 aaPredicted RBP4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 CLEC2LP0C7M8 214 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 SDC2P34741 201 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms