RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 PRR30Q53SZ7 412 aaPredicted RBP9.12□□□□□ -0.95
COL27A1-204ENST00000477421 FAM209BQ5JX69 171 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 TREML4Q6UXN2 200 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 TMEM14EPQ6UXP3 125 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 HEPN1Q6WQI6 88 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 DIRC2Q96SL1 478 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 HSPB9Q9BQS6 159 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
COL27A1-204ENST00000477421 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 K7EM74 188 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 MC5RP33032 325 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 SRSF7Q16629 238 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL27A1-204ENST00000477421 LEMD1Q68G75 181 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 Q6ZS49 121 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 PRNTQ86SH4 94 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 PERPQ96FX8 193 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 CELSR3Q9NYQ7 3312 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 C20orf202A1L168 122 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 P01737 135 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 MMD2Q8IY49 270 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 ZNF430Q9H8G1 570 aaPredicted RBP9.11□□□□□ -0.95
COL27A1-204ENST00000477421 HTR1DP28221 377 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 GPR6P46095 362 aaPredicted RBP9.11□□□□□ -0.95
COL27A1-204ENST00000477421 TBX15Q96SF7 602 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 TUBA4BQ9H853 241 aa9.11□□□□□ -0.95
COL27A1-204ENST00000477421 USP9YO00507 2555 aaPredicted RBP9.11□□□□□ -0.95
COL27A1-204ENST00000477421 EML5Q05BV3 1969 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 EYSQ5T1H1 3165 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 IGHV3OR16-10A0A075B7F0 116 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 TRBV6-6A0A0A6YYG2 114 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 TNFSF13O75888 250 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 PAX6P26367 422 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 SPACA3Q8IXA5 215 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 CLEC5AQ9NY25 188 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
COL27A1-204ENST00000477421 C15orf61A6NNL5 157 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 C10orf142B7Z368 130 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 GFRA3O60609 400 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 ZNF596Q8TC21 504 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
COL27A1-204ENST00000477421 IFI27L2Q9H2X8 130 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 OR51M1Q9H341 326 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 PYYP10082 97 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 ERVK11-1P61568 191 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 EFNB3Q15768 340 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 KHDC1LQ5JSQ8 128 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 LINC00305Q7Z4B0 112 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 TMEM186Q96B77 213 aa9.1□□□□□ -0.95
COL27A1-204ENST00000477421 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
COL27A1-204ENST00000477421 A0A0G2JNJ9 132 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 IGHV3-23P01764 117 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 MBNL2Q5VZF2 373 aaKnown RBP9.09□□□□□ -0.95
COL27A1-204ENST00000477421 RNASE6Q93091 150 aaKnown RBP9.09□□□□□ -0.95
COL27A1-204ENST00000477421 GGTLC1Q9BX51 225 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 Q9UFV3 132 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 LINC00312Q9Y6C7 94 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 TRAV5A0A0B4J249 113 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 C15orf62A8K5M9 175 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 APOBEC3AP31941 199 aaPredicted RBP9.09□□□□□ -0.95
COL27A1-204ENST00000477421 PLA2G5P39877 138 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 TCTAP57738 103 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 C1QL4Q86Z23 238 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 OCC1Q8TAD7 63 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 CHRDL1Q9BU40 450 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 RPUSD1Q9UJJ7 312 aaKnown RBP9.09□□□□□ -0.95
COL27A1-204ENST00000477421 RAXQ9Y2V3 346 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 DPRXA6NFQ7 191 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 CA1P00915 261 aaPredicted RBP9.09□□□□□ -0.95
COL27A1-204ENST00000477421 IGKV1D-33P01593 117 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 IGKV1-33P01594 117 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 Q6ZPA2 131 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
COL27A1-204ENST00000477421 CLEC7AQ9BXN2 247 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 THYN1Q9P016 225 aa9.09□□□□□ -0.95
COL27A1-204ENST00000477421 MBD3L4A6NDZ8 208 aaPredicted RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 MBD3L3A6NE82 208 aaPredicted RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 MBD3L5A6NJ08 208 aaPredicted RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 UPK2O00526 184 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 HOXA5P20719 270 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 Q6ZS92 163 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 MBD3L2Q8NHZ7 208 aaPredicted RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 RNF2Q99496 336 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 HIGD1AQ9Y241 93 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 A0A087WWC5 75 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 C5orf52A6NGY3 159 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 CGB1A6NKQ9 187 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 FOXH1O75593 365 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 SRP14P37108 136 aaKnown RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 CD81P60033 236 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 SPRNQ5BIV9 151 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 M0R2Z0 102 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 APCSP02743 223 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 SRIP30626 198 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 328.1 ms