RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CCDC140Q96MF4 163 aa12.23□□□□□ -0.45
COPS3-207ENST00000477299 ZC4H2Q9NQZ6 224 aa12.23□□□□□ -0.45
COPS3-207ENST00000477299 MRPL36Q9P0J6 103 aaKnown RBP12.23□□□□□ -0.45
COPS3-207ENST00000477299 A0A0G2JLM5 398 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 I3L2K1 104 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 WRBO00258 174 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 GOSR2O14653 212 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 SYNGR2O43760 224 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 TMEM50AO95807 157 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 MBPP02686 304 aaPredicted RBP12.22□□□□□ -0.45
COPS3-207ENST00000477299 HIST1H1BP16401 226 aaKnown RBP12.22□□□□□ -0.45
COPS3-207ENST00000477299 IL15RAQ13261 267 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 PVRIGQ6DKI7 326 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 OR4F17Q8NGA8 305 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 SCARB1Q8WTV0 552 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 PINX1Q96BK5 328 aaKnown RBP12.22□□□□□ -0.45
COPS3-207ENST00000477299 OR4F4Q96R69 305 aa12.22□□□□□ -0.45
COPS3-207ENST00000477299 FNDC4Q9H6D8 234 aaPredicted RBP12.22□□□□□ -0.45
COPS3-207ENST00000477299 PIGBOS1A0A0B4J2F0 54 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 F8W735 103 aaPredicted RBP12.21□□□□□ -0.45
COPS3-207ENST00000477299 SSNA1O43805 119 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 MT-CO2P00403 227 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 MYCNOSP40205 109 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 NKX2-1P43699 371 aaPredicted RBP12.21□□□□□ -0.45
COPS3-207ENST00000477299 PAX9P55771 341 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 FHL3Q13643 280 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 C2orf50Q96LR7 162 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 OR4C12Q96R67 309 aa12.21□□□□□ -0.45
COPS3-207ENST00000477299 NBEAL1Q6ZS30 2694 aa12.21□□□□□ -0.46
COPS3-207ENST00000477299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.2□□□□□ -0.46
COPS3-207ENST00000477299 FAM90A26D6RGX4 464 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 H3BP45 60 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 BMPR1BO00238 502 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 PF4P02776 101 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
COPS3-207ENST00000477299 H2BFSP57053 126 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 PRR31Q5SQ13 230 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 TREML4Q6UXN2 200 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 GSG1LQ6UXU4 331 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 HIPK2Q9H2X6 1198 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 PEF1Q9UBV8 284 aaKnown RBP12.2□□□□□ -0.46
COPS3-207ENST00000477299 RCL1Q9Y2P8 373 aaKnown RBP12.2□□□□□ -0.46
COPS3-207ENST00000477299 NOTCH3Q9UM47 2321 aa12.2□□□□□ -0.46
COPS3-207ENST00000477299 C15orf62A8K5M9 175 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 LINC01619G3V211 115 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 SSSCA1O60232 199 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 IFNA10P01566 189 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 CLEC3BP05452 202 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 CXCL3P19876 107 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 NPY1RP25929 384 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 HTR2BP41595 481 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 DCUN1D4Q92564 292 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 DPF1Q92782 380 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
COPS3-207ENST00000477299 EEF1AKMT3Q96AZ1 226 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 ZNF414Q96IQ9 312 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 MGAT4CQ9UBM8 478 aa12.19□□□□□ -0.46
COPS3-207ENST00000477299 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
COPS3-207ENST00000477299 IGHV3-35A0A0C4DH35 117 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 CCNKO75909 580 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 OR2C1O95371 312 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
COPS3-207ENST00000477299 GPR183P32249 361 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 RAB32Q13637 225 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 FCN2Q15485 313 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 VN1R17PQ8TDU5 208 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 CHRDL1Q9BU40 450 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 RANGRFQ9HD47 186 aaPredicted RBP12.18□□□□□ -0.46
COPS3-207ENST00000477299 THYN1Q9P016 225 aa12.18□□□□□ -0.46
COPS3-207ENST00000477299 OR2T8A6NH00 312 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 K7EPK0 472 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 MED6O75586 246 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 ADMP35318 185 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
COPS3-207ENST00000477299 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 OR11H7Q8NGC8 314 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 C21orf62Q9NYP8 219 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 PAIP2BQ9ULR5 123 aaKnown RBP12.17□□□□□ -0.46
COPS3-207ENST00000477299 U3KQ87 197 aa12.17□□□□□ -0.46
COPS3-207ENST00000477299 TRBV7-1A0A0A6YYK4 115 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 IGLL1P15814 213 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 EDN2P20800 178 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 ARL3P36405 182 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 WFDC9Q8NEX5 89 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 SMIM8Q96KF7 97 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 PSENENQ9NZ42 101 aa12.16□□□□□ -0.46
COPS3-207ENST00000477299 H0YIZ8 118 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms