RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 ZNF256Q9Y2P7 627 aaPredicted RBP13.24□□□□□ -0.29
SMARCD3-210ENST00000477169 F11RQ9Y624 299 aaKnown RBP13.24□□□□□ -0.29
SMARCD3-210ENST00000477169 LINC01619G3V211 115 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 OVOL1O14753 267 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 NDUFB8O95169 186 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 IFNA21P01568 189 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 NHLRC4P0CG21 123 aaPredicted RBP13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 ATP5G2Q06055 141 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 TNFRSF9Q07011 255 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 C12orf45Q8N5I9 185 aaPredicted RBP13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 ENY2Q9NPA8 101 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 CACFD1Q9UGQ2 172 aa13.23□□□□□ -0.29
SMARCD3-210ENST00000477169 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 PRAF2O60831 178 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 SLC25A24Q6NUK1 477 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 ZNF343Q6P1L6 599 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 UXS1Q8NBZ7 420 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 ZNF114Q8NC26 417 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 OR1P1Q8NH06 330 aa13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 DLX4Q92988 240 aaPredicted RBP13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 GPN1Q9HCN4 374 aaPredicted RBP13.22□□□□□ -0.29
SMARCD3-210ENST00000477169 SNRPGP15A8MWD9 76 aa13.21□□□□□ -0.29
SMARCD3-210ENST00000477169 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
SMARCD3-210ENST00000477169 EXOSC2Q13868 293 aaKnown RBP13.21□□□□□ -0.29
SMARCD3-210ENST00000477169 OR1L6Q8NGR2 347 aa13.21□□□□□ -0.29
SMARCD3-210ENST00000477169 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
SMARCD3-210ENST00000477169 RBKSQ9H477 322 aa13.21□□□□□ -0.29
SMARCD3-210ENST00000477169 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 A0A087WW49 117 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 FAM90A26D6RGX4 464 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 CCSO14618 274 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 CYB5BO43169 146 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 SNCAP37840 140 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 SLURP1P55000 103 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 BSXQ3C1V8 233 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 WWC2-AS2Q96NR7 200 aa13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
SMARCD3-210ENST00000477169 ANKRD34BA5PLL1 514 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 MFSD2BA6NFX1 497 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 SAP30O75446 220 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 PVRIGQ6DKI7 326 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 OR4D5Q8NGN0 318 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 DTD1Q8TEA8 209 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 THYN1Q9P016 225 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 S4R3C0 116 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 SORL1Q92673 2214 aa13.19□□□□□ -0.3
SMARCD3-210ENST00000477169 LY86O95711 162 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 IGHV3-23P01764 117 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 ID3Q02535 119 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 RGS21Q2M5E4 152 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 ZBTB8BQ8NAP8 495 aaPredicted RBP13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 CXorf58Q96LI9 332 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 PEF1Q9UBV8 284 aaKnown RBP13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
SMARCD3-210ENST00000477169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 IGHV3-21A0A0B4J1V1 117 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 K7EIM0 57 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 MED6O75586 246 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 HTR2BP41595 481 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 TATDN3Q17R31 274 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 VN1R17PQ8TDU5 208 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 MAGT1Q9H0U3 335 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 SMAD5-AS1Q9Y6J3 95 aa13.17□□□□□ -0.3
SMARCD3-210ENST00000477169 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 C5orf51A6NDU8 294 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 FAM25EA8MYX2 175 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 I3L2K1 104 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 SYNGR2O43760 224 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 IAPPP10997 89 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 C2orf83Q53S99 150 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 ZNF502Q8TBZ5 544 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 TMEM170AQ8WVE7 144 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 RANGRFQ9HD47 186 aaPredicted RBP13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 GSKIPQ9P0R6 139 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 U3KQK5 164 aa13.16□□□□□ -0.3
SMARCD3-210ENST00000477169 MT-CO2P00403 227 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 NPY1RP25929 384 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 OXA1LQ15070 435 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 FAM209BQ5JX69 171 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 GSG1LQ6UXU4 331 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 SCARB1Q8WTV0 552 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 C2orf50Q96LR7 162 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 OR4C12Q96R67 309 aa13.15□□□□□ -0.3
SMARCD3-210ENST00000477169 ELOVL1Q9BW60 279 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms