RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IGKV1D-39P04432 117 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 ZNF688P0C7X2 276 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 SDC2P34741 201 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 RFX2P48378 723 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 HSPA13P48723 471 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 PPP5CP53041 499 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 MFAP4P55083 255 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 TCTAP57738 103 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 ERVK-16P61578 105 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 RELQ04864 619 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-219ENST00000476625 GSG1LQ6UXU4 331 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 STHQ8IWL8 128 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 CMTM3Q96MX0 182 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 AIFM2Q9BRQ8 373 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 VSIRQ9H7M9 311 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 AUNIPQ9H7T9 357 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 F2RP25116 425 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 TGFBR1P36897 503 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 RANBP1P43487 201 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 HERV-K104P61576 105 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 PHLDA2Q53GA4 152 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 IDNKQ5T6J7 187 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 UBE2UQ5VVX9 321 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 PVRIGQ6DKI7 326 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
HDAC6-219ENST00000476625 STXBP6Q8NFX7 210 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 OR5AP2Q8NGF4 316 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 ZNF2Q9BSG1 426 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-219ENST00000476625 HRH4Q9H3N8 390 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 PUS1Q9Y606 427 aaKnown RBP eCLIP8.61□□□□□ -1.03
HDAC6-219ENST00000476625 NACAE9PAV3 2078 aa8.61□□□□□ -1.03
HDAC6-219ENST00000476625 ZNF705EA8MWA4 302 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-219ENST00000476625 K7EQG2 157 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 GNG7O60262 68 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 SNAPC5O75971 98 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 PSMB9P28065 219 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 MLANAQ16655 118 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 ACTL10Q5JWF8 245 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-219ENST00000476625 POM121L12Q8N7R1 296 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 OR1P1Q8NH06 330 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 PLA2G2EQ9NZK7 142 aa8.6□□□□□ -1.03
HDAC6-219ENST00000476625 AMBPP02760 352 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 EIF4EP06730 217 aaKnown RBP8.59□□□□□ -1.03
HDAC6-219ENST00000476625 FGF2P09038 288 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 MIFP14174 115 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 CMC4P56277 68 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-219ENST00000476625 DEFB1P60022 68 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 PAFAH1B2P68402 229 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 MOB3AQ96BX8 217 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 TMEM56Q96MV1 263 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 RNF126Q9BV68 326 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 PRNDQ9UKY0 176 aa8.59□□□□□ -1.03
HDAC6-219ENST00000476625 ATP6V1G2O95670 118 aa8.58□□□□□ -1.04
HDAC6-219ENST00000476625 FGF9P31371 208 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-219ENST00000476625 TSPAN14Q8NG11 270 aa8.58□□□□□ -1.04
HDAC6-219ENST00000476625 MRGPRFQ96AM1 343 aa8.58□□□□□ -1.04
HDAC6-219ENST00000476625 IFT46Q9NQC8 304 aa8.58□□□□□ -1.04
HDAC6-219ENST00000476625 TBC1D24Q9ULP9 559 aa8.58□□□□□ -1.04
HDAC6-219ENST00000476625 SCGNO76038 276 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 FXYD7P58549 80 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 PRCDQ00LT1 54 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 IZUMO2Q6UXV1 221 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 ZNF600Q6ZNG1 722 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 TBC1D26Q86UD7 250 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 DCANP1Q8TF63 244 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 SEC22AQ96IW7 307 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 GINS3Q9BRX5 216 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 Q9H521 79 aa8.57□□□□□ -1.04
HDAC6-219ENST00000476625 LOC100506127A0A0U1RQW1 187 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 GPR31O00270 319 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 TMEM50AO95807 157 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 P2RY1P47900 373 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 EMP1P54849 157 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 TIGITQ495A1 244 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 PSMG4Q5JS54 123 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 DHRS11Q6UWP2 260 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 Q6ZR54 194 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 DUSP18Q8NEJ0 188 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 OR4A16Q8NH70 328 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 TXN2Q99757 166 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 FNDC4Q9H6D8 234 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-219ENST00000476625 XCL2Q9UBD3 114 aa8.56□□□□□ -1.04
HDAC6-219ENST00000476625 P0DMU3 169 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 SPP1P10451 314 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 HLA-DMAP28067 261 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 MORN3Q6PF18 240 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-219ENST00000476625 Q6ZRM9 215 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 H2BFWTQ7Z2G1 175 aa8.55□□□□□ -1.04
HDAC6-219ENST00000476625 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms