RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 LSM2Q9Y333 95 aaKnown RBP9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 A0A0D9SG52 128 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 LY6LH3BQJ8 138 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 FGF16O43320 207 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR2A4O95047 310 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 TYMSP04818 313 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 FAM106CPP0CH98 169 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 VSIG10L2P0DP72 767 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 CHATP28329 748 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 RPL29P47914 159 aaKnown RBP9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 SEC61GP60059 68 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 RUNX1Q01196 453 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 TMEM30BQ3MIR4 351 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 PDZD11Q5EBL8 140 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 ACSM6Q6P461 480 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 RNASEKQ6P5S7 137 aaKnown RBP9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 ZNF497Q6ZNH5 498 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 GBGT1Q8N5D6 347 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 RFESDQ8TAC1 157 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 GALMQ96C23 342 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR2A7Q96R45 310 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 HIST1H2BLQ99880 126 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 PSMG3Q9BT73 122 aaPredicted RBP9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 SELENOIQ9C0D9 397 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 SERTAD4Q9NUC0 356 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 C14orf166Q9Y224 244 aaKnown RBP9.21□□□□□ -0.94
HLA-DOB-208ENST00000475235 GNG7O60262 68 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR5H8P0DN80 308 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR10J1P30954 320 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 PLP1P60201 277 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 TNXAQ16473 311 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 LTC4SQ16873 150 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 FAAP20Q6NZ36 180 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 ZNF705AQ6ZN79 300 aaPredicted RBP9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 CEACAM19Q7Z692 300 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 LRRTM1Q86UE6 522 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 C15orf40Q8WUR7 153 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 SLC25A33Q9BSK2 321 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 SLC25A31Q9H0C2 315 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 TRRAPQ9Y4A5 3859 aa9.2□□□□□ -0.94
HLA-DOB-208ENST00000475235 ARPC1BO15143 372 aaKnown RBP9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 MPIG6BO95866 241 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 FABP4P15090 132 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 GADD45AP24522 165 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 VDAC2P45880 294 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 INPP1P49441 399 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 BLCAPP62952 87 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 PYDC2Q56P42 97 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 TMEM183AQ8IXX5 376 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 GAPTQ8N292 157 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 C8orf31Q8N9H6 132 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR9G4Q8NGQ1 327 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 LEAP2Q969E1 77 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 Q96M66 194 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 ST6GALNAC5Q9BVH7 336 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 MAP1LC3CQ9BXW4 147 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 BANF2Q9H503 90 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 TRAPPC2LQ9UL33 140 aa9.19□□□□□ -0.94
HLA-DOB-208ENST00000475235 C15orf65H3BRN8 121 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 SDCBPO00560 298 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 SPINT2O43291 252 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 PDCD6O75340 191 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 ARL6IP5O75915 188 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 ACTL6BO94805 426 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 NDUFB8O95169 186 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR5G3P0C626 314 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 AZU1P20160 251 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 CD24P25063 80 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 IL3RAP26951 378 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 MLLT11Q13015 90 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 INSL4Q14641 139 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 C1orf100Q5SVJ3 147 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 UTF1Q5T230 341 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 FAM27D1Q5T7N8 215 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 LINC00311Q8N616 119 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 WNT10AQ9GZT5 417 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 RBKSQ9H477 322 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 Q9N2K0 584 aa9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
HLA-DOB-208ENST00000475235 C13orf42A0A1B0GVH6 325 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 IFNA1P01562 189 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 IGHV3-7P01780 117 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 CD74P04233 296 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 SDC2P34741 201 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 PJVKQ0ZLH3 352 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 SMIM20Q8N5G0 67 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 C11orf44Q8N8P7 122 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR1S2Q8NGQ3 325 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
HLA-DOB-208ENST00000475235 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 C12orf77C9JDV5 145 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 HSD17B6O14756 317 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 ST8SIA3O43173 380 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 SCGNO76038 276 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 CDS2O95674 445 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms