RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 MRAPQ8TCY5 172 aa12.37□□□□□ -0.43
SRM-204ENST00000475189 MISP3Q96FF7 219 aa12.37□□□□□ -0.43
SRM-204ENST00000475189 ENY2Q9NPA8 101 aa12.37□□□□□ -0.43
SRM-204ENST00000475189 I3L2K1 104 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 CSN3P07498 182 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 RNASE2P10153 161 aaKnown RBP12.36□□□□□ -0.43
SRM-204ENST00000475189 SNCAP37840 140 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 ZC4H2Q9NQZ6 224 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
SRM-204ENST00000475189 PIGBOS1A0A0B4J2F0 54 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 A0A1B0GU03 582 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 C9orf170A2RU37 121 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 OR2T8A6NH00 312 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
SRM-204ENST00000475189 TGOLN2O43493 480 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 IGLV1-51P01701 117 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 ZNF846Q147U1 533 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 BSXQ3C1V8 233 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 HAPLN4Q86UW8 402 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 PRR25Q96S07 402 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 WDR12Q9GZL7 423 aaKnown RBP12.35□□□□□ -0.43
SRM-204ENST00000475189 SIGLEC8Q9NYZ4 499 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 TGP01266 2768 aa12.35□□□□□ -0.43
SRM-204ENST00000475189 CEBPZOSA8MTT3 80 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 LGALS9O00182 355 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 NXPH3O95157 252 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 MT-CO2P00403 227 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 OR4E1P0C645 316 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
SRM-204ENST00000475189 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRM-204ENST00000475189 FAM106AQ4KMX7 169 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 PLET1Q6UQ28 207 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 PINX1Q96BK5 328 aaKnown RBP12.34□□□□□ -0.43
SRM-204ENST00000475189 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
SRM-204ENST00000475189 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
SRM-204ENST00000475189 HSPB7Q9UBY9 170 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 CACFD1Q9UGQ2 172 aa12.34□□□□□ -0.43
SRM-204ENST00000475189 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
SRM-204ENST00000475189 IGHV3-35A0A0C4DH35 117 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 PITX3O75364 302 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 TCRBP04435 133 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 SPNP16150 400 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 MFAP4P55083 255 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 TNFRSF9Q07011 255 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 DHRS2Q13268 280 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 Q56UQ5 140 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 C11orf87Q6NUJ2 197 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 LYG2Q86SG7 212 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 UBAC2Q8NBM4 344 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 OR1S1Q8NH92 325 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 ZNF436Q9C0F3 470 aaPredicted RBP12.33□□□□□ -0.44
SRM-204ENST00000475189 C20orf85Q9H1P6 137 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 TBC1D24Q9ULP9 559 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 TMED3Q9Y3Q3 217 aa12.33□□□□□ -0.44
SRM-204ENST00000475189 C2orf70A6NJV1 201 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 LY86O95711 162 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 CTSGP08311 255 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 HOXB5P09067 269 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 SLC25A6P12236 298 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 EDN2P20800 178 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 FCGR2BP31994 310 aaPredicted RBP12.32□□□□□ -0.44
SRM-204ENST00000475189 ADMP35318 185 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 HTR2BP41595 481 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 GGNBP1Q5YKI7 109 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 TXN2Q99757 166 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 RBKSQ9H477 322 aa12.32□□□□□ -0.44
SRM-204ENST00000475189 ZNF320A2RRD8 509 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 A8MWP6 167 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 CORTO00230 105 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 UPK1BO75841 260 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 ASAH1Q13510 395 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 C4orf46Q504U0 113 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 C2orf83Q53S99 150 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 UNQ9165/PRO28630Q6UXU0 137 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 DTD1Q8TEA8 209 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 TMEM170AQ8WVE7 144 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 HIPK2Q9H2X6 1198 aa12.31□□□□□ -0.44
SRM-204ENST00000475189 FNDC4Q9H6D8 234 aaPredicted RBP12.31□□□□□ -0.44
SRM-204ENST00000475189 GAR1Q9NY12 217 aaKnown RBP12.31□□□□□ -0.44
SRM-204ENST00000475189 TMEM213A2RRL7 107 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 ADAP1O75689 374 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 FOLR2P14207 255 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 GP9P14770 177 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 IFITM3Q01628 133 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 MLANAQ16655 118 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 COQ8AQ8NI60 647 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 ZNF414Q96IQ9 312 aa12.3□□□□□ -0.44
SRM-204ENST00000475189 LSM4Q9Y4Z0 139 aaKnown RBP12.3□□□□□ -0.44
SRM-204ENST00000475189 TRAV6A0A075B6T7 132 aa12.29□□□□□ -0.44
SRM-204ENST00000475189 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
SRM-204ENST00000475189 NDUFA4O00483 81 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms