RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TMEM187Q14656 261 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 SLC25A24Q6NUK1 477 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 SLC35G3Q8N808 338 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 EEF1AKMT3Q96AZ1 226 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 PLEKHA3Q9HB20 300 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 GPN1Q9HCN4 374 aaPredicted RBP11.53□□□□□ -0.56
VARS-223ENST00000474643 ENY2Q9NPA8 101 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 FLVCR2Q9UPI3 526 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 NDUFB8O95169 186 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 ANXA7P20073 488 aaKnown RBP11.52□□□□□ -0.57
VARS-223ENST00000474643 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.57
VARS-223ENST00000474643 WT1-ASQ06250 92 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 SPINK9Q5DT21 86 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 SELENOHQ8IZQ5 122 aaKnown RBP11.52□□□□□ -0.57
VARS-223ENST00000474643 LGI3Q8N145 548 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 COQ8AQ8NI60 647 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 MITD1Q8WV92 249 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 CXorf58Q96LI9 332 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 FANCD2OSQ96PS1 177 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 S4R3C0 116 aa11.52□□□□□ -0.57
VARS-223ENST00000474643 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
VARS-223ENST00000474643 TRAV6A0A075B6T7 132 aa11.51□□□□□ -0.57
VARS-223ENST00000474643 HLA-AP01891 365 aaKnown RBP11.51□□□□□ -0.57
VARS-223ENST00000474643 VAMP1P23763 118 aa11.51□□□□□ -0.57
VARS-223ENST00000474643 ERHP84090 104 aaKnown RBP11.51□□□□□ -0.57
VARS-223ENST00000474643 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
VARS-223ENST00000474643 ZNF431Q8TF32 576 aaPredicted RBP11.51□□□□□ -0.57
VARS-223ENST00000474643 SPATA25Q9BR10 227 aa11.51□□□□□ -0.57
VARS-223ENST00000474643 PRR13Q9NZ81 148 aa11.51□□□□□ -0.57
VARS-223ENST00000474643 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
VARS-223ENST00000474643 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
VARS-223ENST00000474643 BMPR1BO00238 502 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 ST8SIA3O43173 380 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 GGCTO75223 188 aaKnown RBP11.5□□□□□ -0.57
VARS-223ENST00000474643 CSN3P07498 182 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 SLC25A6P12236 298 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 HOXA1P49639 335 aaPredicted RBP11.5□□□□□ -0.57
VARS-223ENST00000474643 CD81P60033 236 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 GUCA2BQ16661 112 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 CLEC19AQ6UXS0 136 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 OR2K2Q8NGT1 345 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 LHFPL5Q8TAF8 219 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 TMED3Q9Y3Q3 217 aa11.5□□□□□ -0.57
VARS-223ENST00000474643 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 A0A0B4J293 547 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 A0A0G2JRQ6 117 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 PPP5D1E7EU14 171 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 P0C879 139 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 ARL3P36405 182 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 SNCAP37840 140 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 AARDQ4LEZ3 155 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 CASC10Q5T4H9 136 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 Q8N1Y9 231 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 GPR146Q96CH1 333 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 MISP3Q96FF7 219 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
VARS-223ENST00000474643 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
VARS-223ENST00000474643 IGHV3-21A0A0B4J1V1 117 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 ZNF320A2RRD8 509 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 MFSD2BA6NFX1 497 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 FAM106AQ4KMX7 169 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 OR2C3Q8N628 320 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
VARS-223ENST00000474643 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
VARS-223ENST00000474643 A0A1B0GU03 582 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 CLEC3BP05452 202 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 SULT1A3P0DMM9 295 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 SULT1A4P0DMN0 295 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 GPR183P32249 361 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 SUB1P53999 127 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■□□□ 11.8
VARS-223ENST00000474643 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
VARS-223ENST00000474643 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 C12orf45Q8N5I9 185 aaPredicted RBP11.47□□□□□ -0.57
VARS-223ENST00000474643 UBAC2Q8NBM4 344 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 PINX1Q96BK5 328 aaKnown RBP11.47□□□□□ -0.57
VARS-223ENST00000474643 NEURL2Q9BR09 285 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
VARS-223ENST00000474643 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 A8MZ25 164 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 NXPH3O95157 252 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 OR2C1O95371 312 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 SPCS3P61009 180 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 HAGHQ16775 308 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 KLK9Q2XQG4 91 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 Q56UQ5 140 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 NMSQ5H8A3 153 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 Q6ZRM9 215 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms