RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 E7EUB6 86 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 CLDN34H7C241 214 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 MPDU1O75352 247 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 FABP1P07148 127 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 CTRB1P17538 263 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 FGF7P21781 194 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 GPX4P36969 197 aaPredicted RBP8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 HILS1P60008 231 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 NDPQ00604 133 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 RPL7L1Q6DKI1 246 aaKnown RBP8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 CTRB2Q6GPI1 263 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 LAMTOR1Q6IAA8 161 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 ACSM6Q6P461 480 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 BAP18Q8IXM2 172 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 HSD17B11Q8NBQ5 300 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 CACNG8Q8WXS5 425 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 GSX1Q9H4S2 264 aaPredicted RBP8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 NPVFQ9HCQ7 196 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 FBXO7Q9Y3I1 522 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 FNDC10F2Z333 226 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 H3BUA1 57 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 CRLF1O75462 422 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 IGF1P05019 195 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 CRYGCP07315 174 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 RNASE1P07998 156 aaKnown RBP8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 PF4V1P10720 104 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 RAB14P61106 215 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 BLCAPP62952 87 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 SSBP2P81877 361 aaPredicted RBP8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 CD69Q07108 199 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 BSXQ3C1V8 233 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 TEPPQ6URK8 271 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 ST8SIA2Q92186 375 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 PHYHIPLQ96FC7 376 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 CXorf58Q96LI9 332 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 GAR1Q9NY12 217 aaKnown RBP8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 FBXL7Q9UJT9 491 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 TNCP24821 2201 aa8.1□□□□□ -1.11
PRPF38A-202ENST00000474048 A0A1B0GW64 132 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 PSMB11A5LHX3 300 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 FAM181BA6NEQ2 426 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 FAM223BA6NKX1 122 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 ZFP92A6NM28 416 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 G3V318 75 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 SOX15O60248 233 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 GNG7O60262 68 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 OR2J3O76001 311 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 MT-CO2P00403 227 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 TRGV3P03979 118 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 AMY1AP04745 511 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 NPBWR1P48145 328 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 TPPP2P59282 170 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 Q56UQ5 140 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 CENPVQ7Z7K6 275 aaPredicted RBP8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 FAM223AQ8IWN6 122 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 STOML3Q8TAV4 291 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 EEF1AKMT3Q96AZ1 226 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 UBQLN2Q9UHD9 624 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 LINC00527Q9UJ94 153 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 ZNF580Q9UK33 172 aa8.09□□□□□ -1.11
PRPF38A-202ENST00000474048 TEX15Q9BXT5 2789 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 TRAV30A0A087WSZ9 112 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 A0A0G2JLM5 398 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 PRH1P02810 166 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 RND2P52198 227 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 MFAP4P55083 255 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 RHOGP84095 191 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 ATP5G2Q06055 141 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 TEX38Q6PEX7 206 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 ZNF767PQ75MW2 155 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 HAPLN4Q86UW8 402 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 NECAP1Q8NC96 275 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 OR4X2Q8NGF9 303 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 OR2G3Q8NGZ4 309 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 TAF15Q92804 592 aaKnown RBP eCLIP8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 NOL4LQ96MY1 436 aaPredicted RBP8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 MS4A10Q96PG2 267 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 WDR61Q9GZS3 305 aaKnown RBP8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 ZNF702PQ9H963 129 aa8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 FLNBO75369 2602 aaKnown RBP8.08□□□□□ -1.12
PRPF38A-202ENST00000474048 VPS13CQ709C8 3753 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 IGLV11-55A0A075B6I3 123 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 PMS2P5A8MQ11 134 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 PLXNB1O43157 2135 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 MBP02144 154 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 SEC11BP0C7V7 166 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 EGR2P11161 476 aaPredicted RBP8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 CAMLGP49069 296 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms