RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C9orf170A2RU37 121 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 CORTO00230 105 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 OR2C1O95371 312 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 LY86O95711 162 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 IFNA21P01568 189 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 OR4E1P0C645 316 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 GPR183P32249 361 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 HTR2BP41595 481 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 ANKRD55Q3KP44 614 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 NOXA1Q86UR1 476 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 SCARB1Q8WTV0 552 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 ATP6V0BQ99437 205 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
USF1-205ENST00000473969 TMED3Q9Y3Q3 217 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 DMRT1Q9Y5R6 373 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 CMYA5Q8N3K9 4069 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 ZNF320A2RRD8 509 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 UPK1BO75841 260 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 NXPH3O95157 252 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 TCRBP04435 133 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 HOXB5P09067 269 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 ANXA7P20073 488 aaKnown RBP10.53□□□□□ -0.72
USF1-205ENST00000473969 BTCP35070 178 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 MFAP2P55001 183 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 MFAP4P55083 255 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 AARDQ4LEZ3 155 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 SPSB3Q6PJ21 355 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 MRAPQ8TCY5 172 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 BSCL2Q96G97 398 aaPredicted RBP10.53□□□□□ -0.72
USF1-205ENST00000473969 C20orf85Q9H1P6 137 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
USF1-205ENST00000473969 OR2T8A6NH00 312 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 K7EIM0 57 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 NUPL2O15504 423 aaKnown RBP10.52□□□□□ -0.73
USF1-205ENST00000473969 TGOLN2O43493 480 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 SCGB2A1O75556 95 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 MT-CO2P00403 227 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 SLC25A6P12236 298 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 KRTAP10-11P60412 298 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 DHRS2Q13268 280 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 DCTN2Q13561 401 aaKnown RBP10.52□□□□□ -0.73
USF1-205ENST00000473969 PDLIM3Q53GG5 364 aaPredicted RBP10.52□□□□□ -0.73
USF1-205ENST00000473969 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 TXN2Q99757 166 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 PALMDQ9NP74 551 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 NOTCH1P46531 2555 aa10.52□□□□□ -0.73
USF1-205ENST00000473969 TRAV6A0A075B6T7 132 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 RPS10-NUDT3A0A1W2PQS6 291 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 LGALS9O00182 355 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 GNG7O60262 68 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 MED6O75586 246 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 IFNA10P01566 189 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
USF1-205ENST00000473969 OPRK1P41145 380 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 NPBWR1P48145 328 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 DEFA1P59665 94 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 DEFA3P59666 94 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 ASAH1Q13510 395 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 DEFB121Q5J5C9 76 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 GGNBP1Q5YKI7 109 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 SLC24A4Q8NFF2 622 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 ENKURQ8TC29 256 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 DTD1Q8TEA8 209 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 DYNLRB2Q8TF09 96 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 NUDT15Q9NV35 164 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
USF1-205ENST00000473969 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
USF1-205ENST00000473969 I3L2K1 104 aa10.5□□□□□ -0.73
USF1-205ENST00000473969 H2AFB2P0C5Z0 115 aa10.5□□□□□ -0.73
USF1-205ENST00000473969 RELQ04864 619 aaPredicted RBP10.5□□□□□ -0.73
USF1-205ENST00000473969 RBKSQ9H477 322 aa10.5□□□□□ -0.73
USF1-205ENST00000473969 SIGLEC8Q9NYZ4 499 aa10.5□□□□□ -0.73
USF1-205ENST00000473969 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
USF1-205ENST00000473969 U3KQ87 197 aa10.5□□□□□ -0.73
USF1-205ENST00000473969 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 FAM90A26D6RGX4 464 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 IGHV3-48P01763 117 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 CSN3P07498 182 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 NPY1RP25929 384 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 ATP5IP56385 69 aaPredicted RBP10.49□□□□□ -0.73
USF1-205ENST00000473969 RPP30P78346 268 aaKnown RBP10.49□□□□□ -0.73
USF1-205ENST00000473969 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 ETFRF1Q6IPR1 90 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 UXS1Q8NBZ7 420 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 RNASEH2CQ8TDP1 164 aaKnown RBP10.49□□□□□ -0.73
USF1-205ENST00000473969 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
USF1-205ENST00000473969 TBC1D24Q9ULP9 559 aa10.49□□□□□ -0.73
USF1-205ENST00000473969 WRBO00258 174 aa10.48□□□□□ -0.73
USF1-205ENST00000473969 NDUFA4O00483 81 aa10.48□□□□□ -0.73
USF1-205ENST00000473969 YIF1AO95070 293 aa10.48□□□□□ -0.73
USF1-205ENST00000473969 IFNA4P05014 189 aa10.48□□□□□ -0.73
USF1-205ENST00000473969 FCGR2BP31994 310 aaPredicted RBP10.48□□□□□ -0.73
USF1-205ENST00000473969 BSXQ3C1V8 233 aa10.48□□□□□ -0.73
USF1-205ENST00000473969 MITD1Q8WV92 249 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms