RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 SECTM1Q8WVN6 248 aa11.37□□□□□ -0.59
HPS4-210ENST00000473782 ANXA10Q9UJ72 324 aa11.37□□□□□ -0.59
HPS4-210ENST00000473782 PUS1Q9Y606 427 aaKnown RBP eCLIP11.37□□□□□ -0.59
HPS4-210ENST00000473782 GNAO1P09471 354 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 HTN3P15516 51 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
HPS4-210ENST00000473782 OR10A3P58181 314 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 HACD4Q5VWC8 232 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 PQLC1Q8N2U9 271 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 KRTAP1-5Q9BYS1 174 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 OR51B2Q9Y5P1 312 aa11.36□□□□□ -0.59
HPS4-210ENST00000473782 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 H3BMM0 161 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 RCN1Q15293 331 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 ZBTB34Q8NCN2 500 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 BPIFB6Q8NFQ5 453 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 OR13F1Q8NGS4 319 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 MISP3Q96FF7 219 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 C18orf15Q96N68 181 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 MND1Q9BWT6 205 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 TMED3Q9Y3Q3 217 aa11.35□□□□□ -0.59
HPS4-210ENST00000473782 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 MARCH11A6NNE9 402 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 GNG7O60262 68 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 CRYBB3P26998 211 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 FGF9P31371 208 aaPredicted RBP11.34□□□□□ -0.59
HPS4-210ENST00000473782 FCGR2CP31995 323 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 FABP5Q01469 135 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 ZNF818PQ6ZRF7 136 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 OR51H1Q8NH63 302 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 S100A14Q9HCY8 104 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 COMMD9Q9P000 198 aa11.34□□□□□ -0.59
HPS4-210ENST00000473782 IFITM5A6NNB3 132 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 ARL6IP5O75915 188 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 ATP5HO75947 161 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 P2RY1P47900 373 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 PSMG4Q5JS54 123 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 CADM3Q8N126 398 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
HPS4-210ENST00000473782 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 TMEM50AO95807 157 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 PPYP01298 95 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
HPS4-210ENST00000473782 NPPCP23582 126 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 PPP5CP53041 499 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 UFD1Q92890 307 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 SLC5A7Q9GZV3 580 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 RFNGQ9Y644 331 aa11.32□□□□□ -0.6
HPS4-210ENST00000473782 METTL21EPA6NDL7 271 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 CATR1Q13166 79 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 FCAMRQ8WWV6 532 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 TMEM231Q9H6L2 316 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
HPS4-210ENST00000473782 U3KQE9 123 aa11.31□□□□□ -0.6
HPS4-210ENST00000473782 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 A0A1W2PS18 150 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 HELTA6NFD8 242 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 KRASP01116 189 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 GNRHRP30968 328 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 G6PCP35575 357 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 FUSP35637 526 aaKnown RBP eCLIP11.3□□□□□ -0.6
HPS4-210ENST00000473782 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
HPS4-210ENST00000473782 ARL6IP1Q15041 203 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 GDF5OSQ5U4N7 250 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
HPS4-210ENST00000473782 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 MDFICQ9P1T7 246 aa11.3□□□□□ -0.6
HPS4-210ENST00000473782 YTHDF2Q9Y5A9 579 aaKnown RBP11.3□□□□□ -0.6
HPS4-210ENST00000473782 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 HLA-DRB4P13762 266 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 RANBP1P43487 201 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 FXYD7P58549 80 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 DEFB1P60022 68 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 DHRS2Q13268 280 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 AADACL3Q5VUY0 350 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 ZNF709Q8N972 641 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 HLA-DRB4X5D2U9 266 aa11.29□□□□□ -0.6
HPS4-210ENST00000473782 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 F2RP25116 425 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 LPAR6P43657 344 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 FXYD4P59646 89 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 ERVK-16P61578 105 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 OGFRL1Q5TC84 451 aaPredicted RBP11.28□□□□□ -0.6
HPS4-210ENST00000473782 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 GLMPQ8WWB7 406 aa11.28□□□□□ -0.6
HPS4-210ENST00000473782 PTGES3LE9PB15 166 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 SNAPC5O75971 98 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 NPBWR1P48145 328 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 TRAM1Q15629 374 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 KCTD21Q4G0X4 260 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms