RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ZNF83P51522 516 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 RPL39P5Q59GN2 51 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 DOLPP1Q86YN1 238 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 CNEP1R1Q8N9A8 125 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 MAFAQ8NHW3 353 aaPredicted RBP5.03□□□□□ -1.6
HERC4-209ENST00000473533 PMCHL2Q9BQD1 86 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 TMEM191AQ9H0A3 160 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 ZNF430Q9H8G1 570 aaPredicted RBP5.03□□□□□ -1.6
HERC4-209ENST00000473533 ASCL3Q9NQ33 180 aa5.03□□□□□ -1.6
HERC4-209ENST00000473533 AMMECR1Q9Y4X0 333 aaPredicted RBP5.03□□□□□ -1.6
HERC4-209ENST00000473533 DOCK7Q96N67 2140 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 IGHV2OR16-5A0A0B4J2B6 119 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 hADV38S2A0JD32 116 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 FAM231BA6NCW3 169 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 A8MWL6 223 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 NPSP0C0P6 89 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 CECR9P0C854 216 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 SPINK2P20155 84 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 NTF3P20783 257 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 C10orf113Q5VZT2 155 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 SPATA31B1PQ5VZV4 182 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 MRPL54Q6P161 138 aaKnown RBP5.02□□□□□ -1.61
HERC4-209ENST00000473533 LYG1Q8N1E2 194 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 ARL6IP6Q8N6S5 226 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 PAXXQ9BUH6 204 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 DIDO1Q9BTC0 2240 aaKnown RBP5.02□□□□□ -1.61
HERC4-209ENST00000473533 SPTAN1Q13813 2472 aaKnown RBP5.02□□□□□ -1.61
HERC4-209ENST00000473533 IGKV1D-17A0A075B6S4 117 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 M0R296 226 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 PEX7O00628 323 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 TOX4O94842 621 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 TOMM40O96008 361 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 IGHV3-13P01766 116 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 SAA2P0DJI9 122 aaPredicted RBP5.02□□□□□ -1.61
HERC4-209ENST00000473533 TSPOP30536 169 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 GATA4P43694 442 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 GUSBP1Q15486 140 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 C12orf54Q6X4T0 127 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 Q6ZR03 302 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 BHLHA15Q7RTS1 189 aaPredicted RBP5.02□□□□□ -1.61
HERC4-209ENST00000473533 VASH2Q86V25 355 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 TPRX1Q8N7U7 411 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 C18orf32Q8TCD1 76 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 Q8TCH9 128 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 PERPQ96FX8 193 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 TMEM70Q9BUB7 260 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 GFRA4Q9GZZ7 299 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 LINC00574Q9H8X3 128 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 PLSCR4Q9NRQ2 329 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 RNF7Q9UBF6 113 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 SSUH2Q9Y2M2 353 aa5.02□□□□□ -1.61
HERC4-209ENST00000473533 PATE3B3GLJ2 98 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 TCF21O43680 179 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 FOXH1O75593 365 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 MFAP2P55001 183 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 NIT1Q86X76 327 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 RBMXL3Q8N7X1 1067 aaKnown RBP5.01□□□□□ -1.61
HERC4-209ENST00000473533 OR10X1Q8NGY0 326 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 FAM222BQ8WU58 562 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 RNASE7Q9H1E1 156 aaKnown RBP5.01□□□□□ -1.61
HERC4-209ENST00000473533 FOXJ2Q9P0K8 574 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 ZNF492Q9P255 531 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 METRNQ9UJH8 293 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 TRAV3A0A0B4J244 114 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 FAM181BA6NEQ2 426 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 A6NNC1 897 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 PROP1O75360 226 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 CGB3P0DN86 165 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 CGB7P0DN87 165 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 GLRXP35754 106 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 HBBP68871 147 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 MEF2CQ06413 473 aaPredicted RBP5.01□□□□□ -1.61
HERC4-209ENST00000473533 S100A7AQ86SG5 101 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 PDPNQ86YL7 162 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 VKORC1L1Q8N0U8 176 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 Q8N976 141 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 OR8B3Q8NGG8 313 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 ZNF596Q8TC21 504 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 DAZAP1Q96EP5 407 aaKnown RBP5.01□□□□□ -1.61
HERC4-209ENST00000473533 FMC1Q96HJ9 113 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 OR8B2Q96RD0 313 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 RNF24Q9Y225 148 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 COX11Q9Y6N1 276 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 TRAV17A0A0B4J275 112 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 IGHV3-64DA0A0J9YX35 117 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 A0A1B0GW15 77 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 GGTLC3B5MD39 225 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 CORTO00230 105 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 RNASE2P10153 161 aaKnown RBP5.01□□□□□ -1.61
HERC4-209ENST00000473533 TCL1AP56279 114 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 FXYD3Q14802 87 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 MMDQ15546 238 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 CT45A1Q5HYN5 189 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 SLC25A48Q6ZT89 311 aaKnown RBP5.01□□□□□ -1.61
HERC4-209ENST00000473533 CT45A3Q8NHU0 189 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 MBD6Q96DN6 1003 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 LOXL4Q96JB6 756 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 MS4A6AQ9H2W1 248 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms