RNA–Protein interactions for RNA: ENST00000473233.5

MCF2L2-208, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2L2, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-208ENST00000473233 USF3Q68DE3 2245 aa13.39□□□□□ -0.27
MCF2L2-208ENST00000473233 WDR87Q6ZQQ6 2873 aa13.39□□□□□ -0.27
MCF2L2-208ENST00000473233 LBHQ53QV2 105 aaPredicted RBP13.39□□□□□ -0.27
MCF2L2-208ENST00000473233 CACNA1BQ00975 2339 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 NCOA6Q14686 2063 aaPredicted RBP13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 PEX7O00628 323 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 PPOXP50336 477 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 EAF1Q96JC9 268 aaPredicted RBP13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 BDP1A6H8Y1 2624 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 C2orf16Q68DN1 1984 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 A0A1B0GV90 55 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 FAM106CPP0CH98 169 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 PRCDQ00LT1 54 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 RNASE7Q9H1E1 156 aaKnown RBP13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 MBNL3Q9NUK0 354 aaKnown RBP13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 ZNF503-AS2A6NEH8 195 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 F5H697 171 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 IL4P05112 153 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 SRSF6Q13247 344 aaKnown RBP13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 SLC25A15Q9Y619 301 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 UTRNP46939 3433 aa13.38□□□□□ -0.27
MCF2L2-208ENST00000473233 OR2T8A6NH00 312 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 STAG3L2P0CL84 134 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 STAG3L3P0CL85 134 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 FOXA3P55318 350 aaPredicted RBP13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 HIST1H2BLQ99880 126 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 UQCR10Q9UDW1 63 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 RPUSD1Q9UJJ7 312 aaKnown RBP13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 GOLT1BQ9Y3E0 138 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 TRAV3A0A0B4J244 114 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 GTF3C1Q12789 2109 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 LOC105371242A0A075B767 164 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 IFITM10A6NMD0 228 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 CD69Q07108 199 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 ATOH7Q8N100 152 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 HIST3H2BBQ8N257 126 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 RNF138Q8WVD3 245 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 ZCCHC14Q8WYQ9 949 aaKnown RBP13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 NEU1Q99519 415 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 IGHV3-35A0A0C4DH35 117 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 CBY3A6NI87 242 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 TBR1Q16650 682 aa13.37□□□□□ -0.27
MCF2L2-208ENST00000473233 TRAV30A0A087WSZ9 112 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 UNQ5815/PRO19632Q6UWF5 114 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 TMEM116Q8NCL8 245 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 PRB3Q04118 309 aaPredicted RBP13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 OR5R1Q8NH85 324 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 CRIM1Q9NZV1 1036 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 PAX9P55771 341 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 TAS2R60P59551 318 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 TWIST1Q15672 202 aa13.36□□□□□ -0.27
MCF2L2-208ENST00000473233 TRAV9-1A0A075B6T8 112 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 IGKV3-15P01624 115 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 IGHG3P01860 377 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 SOD3P08294 240 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 OR10W1Q8NGF6 305 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 DPM3Q9P2X0 92 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 CDC42EP3Q9UKI2 254 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 FOXI3A8MTJ6 420 aaPredicted RBP13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 ANOS1P23352 680 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 BMI1P35226 326 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 HINT1P49773 126 aaPredicted RBP13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 CYYR1Q96J86 154 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 DERL1Q9BUN8 251 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 TBL2Q9Y4P3 447 aaKnown RBP13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 ZFHX2Q9C0A1 2572 aaPredicted RBP13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 HBBP68871 147 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 LINC01551Q86U37 167 aa13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 SEPSECSQ9HD40 501 aaKnown RBP13.35□□□□□ -0.27
MCF2L2-208ENST00000473233 IGKV1D-17A0A075B6S4 117 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 DPRXA6NFQ7 191 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 SERF1AO75920 110 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 S4R3C0 116 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 CKS2P33552 79 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 TIMP3P35625 211 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 FREM1Q5H8C1 2179 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 A0A1W2PRE2 83 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 C15orf62A8K5M9 175 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 DKK1O94907 266 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 PYYP10082 97 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 ADMP35318 185 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 JOSD1Q15040 202 aaPredicted RBP13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 SPANXN1Q5VSR9 72 aa13.34□□□□□ -0.27
MCF2L2-208ENST00000473233 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 MGST2Q99735 147 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 TMEM97Q5BJF2 176 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 CGB1A6NKQ9 187 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 GFRA3O60609 400 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 TCTAP57738 103 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 SSC4DQ8WTU2 575 aa13.33□□□□□ -0.28
MCF2L2-208ENST00000473233 SLC25A33Q9BSK2 321 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms