RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, human

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIK3-208	ENST00000472648	C6orf201	Q7Z4U5	140 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	OR10R2	Q8NGX6	335 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	C15orf40	Q8WUR7	153 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	ARHGAP5-AS1	Q96IT6	56 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648		Q96M66	194 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	GFI1	Q99684	422 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	CMSS1	Q9BQ75	279 aa	Known RBP	4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	FAAP24	Q9BTP7	215 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	TMEM70	Q9BUB7	260 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	LPAR5	Q9H1C0	372 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	MS4A6A	Q9H2W1	248 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	RIMS4	Q9H426	269 aa	Predicted RBP	4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	CCDC59	Q9P031	241 aa	Known RBP	4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	RABAC1	Q9UI14	185 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	SPATA2	Q9UM82	520 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	RFNG	Q9Y644	331 aa		4.09	□□□□□ -1.75
SIK3-208	ENST00000472648	IGHV3OR16-13	A0A075B7E8	117 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648		A0A0A6YYH2	397 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	IGHV3-74	A0A0B4J1X5	117 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	TRAV2	A0A0B4J234	112 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	SMIM9	A6NGZ8	99 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648		A6NJ64	397 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	TMEM14DP	A8MWL7	114 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ST8SIA3	O43173	380 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	HPGDS	O60760	199 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	APOA1	P02647	267 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	IL6R	P08887	468 aa	Predicted RBP	4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF735	P0CB33	412 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	PTBP1	P26599	531 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	GNRHR	P30968	328 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ASIP	P42127	132 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	INPP1	P49441	399 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	LINC00315	P59091	139 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ARPC4	P59998	168 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	NUTF2	P61970	127 aa	Known RBP	4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	UNC119	Q13432	240 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	IL18	Q14116	193 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	KLK9	Q2XQG4	91 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	CDNF	Q49AH0	187 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ACTL10	Q5JWF8	245 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	FAM90A2P	Q658T7	463 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	FAM24B	Q8N5W8	94 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	UBAC2	Q8NBM4	344 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	OR5H6	Q8NGV6	325 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	DIRAS2	Q96HU8	199 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF414	Q96IQ9	312 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ADTRP	Q96IZ2	230 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	TM2D1	Q9BX74	207 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	PECR	Q9BY49	303 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	C12orf4	Q9NQ89	552 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	IFT46	Q9NQC8	304 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	SDHAF2	Q9NX18	166 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF586	Q9NXT0	402 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	XCL2	Q9UBD3	114 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	EXTL2	Q9UBQ6	330 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	AK3	Q9UIJ7	227 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	KLK9	Q9UKQ9	250 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	HSF4	Q9ULV5	492 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	MGAT4A	Q9UM21	535 aa		4.08	□□□□□ -1.76
SIK3-208	ENST00000472648	IGHV3OR16-12	A0A075B7B8	117 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	FABP12	A6NFH5	140 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648		E7EUB6	86 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	NUPL2	O15504	423 aa	Known RBP	4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	KBTBD11	O94819	623 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	YIF1A	O95070	293 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	CD37	P11049	281 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	HIST1H1D	P16402	221 aa	Known RBP	4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	ELK1	P19419	428 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	PRSS3	P35030	304 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	MAS1L	P35410	378 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	CBX5	P45973	191 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	QRFP	P83859	136 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	REL	Q04864	619 aa	Predicted RBP	4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	SPANXN2	Q5MJ10	180 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF880	Q6PDB4	577 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	SNX29P2	Q8IUI4	249 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	LINC00528	Q8N1L1	170 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	FAM89B	Q8N5H3	189 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	DUSP18	Q8NEJ0	188 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	VSTM2A	Q8TAG5	236 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	DYNC2LI1	Q8TCX1	351 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	VN1R17P	Q8TDU5	208 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	NEU1	Q99519	415 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	GINS4	Q9BRT9	223 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	RDH8	Q9NYR8	311 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	RABL2B	Q9UNT1	228 aa		4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	RBM7	Q9Y580	266 aa	Known RBP	4.07	□□□□□ -1.76
SIK3-208	ENST00000472648	TRAV14DV4	A0A0A6YYC5	116 aa		4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	RAB27B	O00194	218 aa		4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	FCGR3B	O75015	233 aa		4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	NAPSA	O96009	420 aa		4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF688	P0C7X2	276 aa		4.06	□□□□□ -1.76
SIK3-208	ENST00000472648		P0C879	139 aa		4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF705D	P0CH99	300 aa	Predicted RBP	4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	ZNF705B	P0CI00	300 aa	Predicted RBP	4.06	□□□□□ -1.76
SIK3-208	ENST00000472648	DNAH10OS	P0CZ25	163 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms