RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 ZNF502Q8TBZ5 544 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 MISP3Q96FF7 219 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 CCDC140Q96MF4 163 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 C21orf62Q9NYP8 219 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 FLVCR2Q9UPI3 526 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 LCE2BO14633 110 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 IFNA21P01568 189 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 DHRS2Q13268 280 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 ASAH1Q13510 395 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 SPSB3Q6PJ21 355 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 PLET1Q6UQ28 207 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 LYG2Q86SG7 212 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 OR1S1Q8NH92 325 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 BSCL2Q96G97 398 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-211ENST00000472490 TXN2Q99757 166 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 HEYLQ9NQ87 328 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-211ENST00000472490 S4R3C0 116 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
BRCA1-211ENST00000472490 PPP5D1E7EU14 171 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 ANXA7P20073 488 aaKnown RBP10.88□□□□□ -0.67
BRCA1-211ENST00000472490 GPR183P32249 361 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 MFAP2P55001 183 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 TNFRSF9Q07011 255 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 PINX1Q96BK5 328 aaKnown RBP10.88□□□□□ -0.67
BRCA1-211ENST00000472490 NUDT15Q9NV35 164 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 HSPB7Q9UBY9 170 aa10.88□□□□□ -0.67
BRCA1-211ENST00000472490 WNK1Q9H4A3 2382 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 FAM90A26D6RGX4 464 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 K7EIM0 57 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 LGALS9O00182 355 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 TGOLN2O43493 480 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 SCGB2A1O75556 95 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 MED6O75586 246 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 OR2C1O95371 312 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 MT-CO2P00403 227 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 MFAP4P55083 255 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 ATP5IP56385 69 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-211ENST00000472490 DEFA1P59665 94 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 DEFA3P59666 94 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 Q56UQ5 140 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 SLC24A4Q8NFF2 622 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 ENKURQ8TC29 256 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 TBC1D24Q9ULP9 559 aa10.87□□□□□ -0.67
BRCA1-211ENST00000472490 TNCP24821 2201 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 TRAV6A0A075B6T7 132 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 RPS10-NUDT3A0A1W2PQS6 291 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 OR2T8A6NH00 312 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 I3L2K1 104 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 NUPL2O15504 423 aaKnown RBP10.86□□□□□ -0.67
BRCA1-211ENST00000472490 LY86O95711 162 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 HOXB5P09067 269 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 RNASE2P10153 161 aaKnown RBP10.86□□□□□ -0.67
BRCA1-211ENST00000472490 FCGR2BP31994 310 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-211ENST00000472490 DCTN2Q13561 401 aaKnown RBP10.86□□□□□ -0.67
BRCA1-211ENST00000472490 BSXQ3C1V8 233 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 GGNBP1Q5YKI7 109 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 PVRIGQ6DKI7 326 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 DUSP18Q8NEJ0 188 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 DTD1Q8TEA8 209 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 MITD1Q8WV92 249 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 PALMDQ9NP74 551 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 U3KQ87 197 aa10.86□□□□□ -0.67
BRCA1-211ENST00000472490 IGHV3-21A0A0B4J1V1 117 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 ZNF320A2RRD8 509 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 GNG7O60262 68 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 PITX3O75364 302 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 NXPH3O95157 252 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 IFNA10P01566 189 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 H2AFB2P0C5Z0 115 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 OPRK1P41145 380 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 NPBWR1P48145 328 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-211ENST00000472490 C2orf83Q53S99 150 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 RNASEH2CQ8TDP1 164 aaKnown RBP10.85□□□□□ -0.67
BRCA1-211ENST00000472490 CIB3Q96Q77 187 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-211ENST00000472490 AURKAIP1Q9NWT8 199 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-211ENST00000472490 VWFP04275 2813 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 PKD1L1Q8TDX9 2849 aa10.85□□□□□ -0.67
BRCA1-211ENST00000472490 NPY1RP25929 384 aa10.84□□□□□ -0.67
BRCA1-211ENST00000472490 KRTAP10-11P60412 298 aa10.84□□□□□ -0.67
BRCA1-211ENST00000472490 RPP30P78346 268 aaKnown RBP10.84□□□□□ -0.67
BRCA1-211ENST00000472490 ETFRF1Q6IPR1 90 aa10.84□□□□□ -0.67
BRCA1-211ENST00000472490 RBKSQ9H477 322 aa10.84□□□□□ -0.67
BRCA1-211ENST00000472490 ZC4H2Q9NQZ6 224 aa10.84□□□□□ -0.67
BRCA1-211ENST00000472490 ZNF256Q9Y2P7 627 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-211ENST00000472490 UFC1Q9Y3C8 167 aa10.84□□□□□ -0.67
BRCA1-211ENST00000472490 NDUFA4O00483 81 aa10.83□□□□□ -0.68
BRCA1-211ENST00000472490 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
BRCA1-211ENST00000472490 PRB2P02812 416 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-211ENST00000472490 CSN3P07498 182 aa10.83□□□□□ -0.68
BRCA1-211ENST00000472490 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
BRCA1-211ENST00000472490 ZNF431Q8TF32 576 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-211ENST00000472490 MARC2Q969Z3 335 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms