RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 IGHV3-49A0A0A0MS15 119 aa16.7■□□□□ 0.26
C9orf3-213ENST00000471978 GABARAPO95166 117 aa16.7■□□□□ 0.26
C9orf3-213ENST00000471978 IGKV1-5P01602 117 aa16.7■□□□□ 0.26
C9orf3-213ENST00000471978 ZNF182P17025 639 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-213ENST00000471978 RPL35AP18077 110 aaKnown RBP16.7■□□□□ 0.26
C9orf3-213ENST00000471978 BMI1P35226 326 aa16.7■□□□□ 0.26
C9orf3-213ENST00000471978 STPG3Q8N7X2 389 aa16.7■□□□□ 0.26
C9orf3-213ENST00000471978 TP53RKQ96S44 253 aa16.7■□□□□ 0.26
C9orf3-213ENST00000471978 TRAV14DV4A0A0A6YYC5 116 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 KIR2DL5BA0A0G2JN68 375 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 KIR2DL5BA0A0G2JPC4 375 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 A0A0J9YWU9 116 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 GNG7O60262 68 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 TBPP20226 339 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 KIR2DL5AQ8N109 375 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 KIR2DL5BQ8NHK3 375 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 GALNT14Q96FL9 552 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 MTFP1Q9UDX5 166 aa16.69■□□□□ 0.26
C9orf3-213ENST00000471978 C3orf85A0A1B0GTC6 90 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 SNCAP37840 140 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 AKR1C2P52895 323 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 PPP5CP53041 499 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 LYG2Q86SG7 212 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 APRG1Q8IVJ8 170 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 SLC35G3Q8N808 338 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 ABHD1Q96SE0 405 aa16.68■□□□□ 0.26
C9orf3-213ENST00000471978 IGHV3OR16-13A0A075B7E8 117 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 IGHV3-74A0A0B4J1X5 117 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 A0A0B4J293 547 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 ATG12O94817 140 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 P0C879 139 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 SMIM18P0DKX4 95 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 TFPI2P48307 235 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 TNFRSF9Q07011 255 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 PMS2P11Q13670 270 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 GPR107Q5VW38 600 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 OR4D10Q8NGI6 311 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 C15orf40Q8WUR7 153 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 RNF183Q96D59 192 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 COPZ2Q9P299 210 aa16.67■□□□□ 0.26
C9orf3-213ENST00000471978 IGKV3-7A0A075B6H7 116 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 CXorf65A6NEN9 183 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 ST8SIA3O43173 380 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 IFNA17P01571 189 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 NPBWR1P48145 328 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 EWSR1Q01844 656 aaKnown RBP eCLIP16.66■□□□□ 0.26
C9orf3-213ENST00000471978 TRIM16LQ309B1 348 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 SP6Q3SY56 376 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 DUSP18Q8NEJ0 188 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 TERB2Q8NHR7 220 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 ZFAND1Q8TCF1 268 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 PDCD10Q9BUL8 212 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 C6orf62Q9GZU0 229 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-213ENST00000471978 MAP6D1Q9H9H5 199 aa16.66■□□□□ 0.26
C9orf3-213ENST00000471978 INS-IGF2F8WCM5 200 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 CMC4P56277 68 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-213ENST00000471978 SCGB2B2Q4G0G5 96 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 TOMM20LQ6UXN7 152 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 GBGT1Q8N5D6 347 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 CCDC71LQ8N9Z2 235 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 TMEM229BQ8NBD8 167 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 GINS3Q9BRX5 216 aa16.65■□□□□ 0.26
C9orf3-213ENST00000471978 RAB3DO95716 219 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 CD74P04233 296 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 ETV6P41212 452 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 SUB1P53999 127 aaKnown RBP eCLIP16.64■□□□□ 0.25
C9orf3-213ENST00000471978 TAS2R19P59542 299 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 ZNF124Q15973 351 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 FAM90A2PQ658T7 463 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 OR13C8Q8NGS7 320 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 BIRC6Q9NR09 4857 aa16.64■□□□□ 0.25
C9orf3-213ENST00000471978 HOXA1P49639 335 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-213ENST00000471978 STEAP1BQ6NZ63 245 aa16.63■□□□□ 0.25
C9orf3-213ENST00000471978 TCF24Q7RTU0 167 aa16.63■□□□□ 0.25
C9orf3-213ENST00000471978 MARCH1Q8TCQ1 289 aa16.63■□□□□ 0.25
C9orf3-213ENST00000471978 ST8SIA2Q92186 375 aa16.63■□□□□ 0.25
C9orf3-213ENST00000471978 RRNAD1Q96FB5 475 aaKnown RBP16.63■□□□□ 0.25
C9orf3-213ENST00000471978 PUS1Q9Y606 427 aaKnown RBP eCLIP16.63■□□□□ 0.25
C9orf3-213ENST00000471978 TMEM50AO95807 157 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 CD5P06127 495 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 RNASE2P10153 161 aaKnown RBP16.62■□□□□ 0.25
C9orf3-213ENST00000471978 UCP1P25874 307 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 PAFAH1B2P68402 229 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 PVRIGQ6DKI7 326 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 ZNF600Q6ZNG1 722 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 RNASE11Q8TAA1 199 aaKnown RBP16.62■□□□□ 0.25
C9orf3-213ENST00000471978 CSTL1Q9H114 145 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 MIXL1Q9H2W2 232 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 ENY2Q9NPA8 101 aa16.62■□□□□ 0.25
C9orf3-213ENST00000471978 A0A0G2JRQ6 117 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 NUPR2A6NF83 97 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 GABARAPH6UMI1 98 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 CORTO00230 105 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 RGS5O15539 181 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 B3GALNT1O75752 331 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 APOHP02749 345 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-213ENST00000471978 VSIRQ9H7M9 311 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 ZFAND3Q9H8U3 227 aa16.61■□□□□ 0.25
C9orf3-213ENST00000471978 IGHV3-66A0A0C4DH42 116 aa16.6■□□□□ 0.25
C9orf3-213ENST00000471978 MPTX1A8MV57 137 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms