RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 USMG5Q96IX5 58 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 TRBV7-1A0A0A6YYK4 115 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 A0A0G2JK05 382 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 PEX7O00628 323 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 GHRHP01286 108 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 SOD3P08294 240 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 IFI6P09912 130 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 ATP6V0CP27449 155 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 RNASEH2CQ8TDP1 164 aaKnown RBP7.14□□□□□ -1.27
CD47-204ENST00000471694 ST6GALNAC6Q969X2 333 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 CTHRC1Q96CG8 243 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
CD47-204ENST00000471694 SLC25A15Q9Y619 301 aa7.14□□□□□ -1.27
CD47-204ENST00000471694 CTDSPLO15194 276 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 RUNX1Q01196 453 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 TMEM183AQ8IXX5 376 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 NABP1Q96AH0 204 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 ST20Q9HBF5 79 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 SCN10AQ9Y5Y9 1956 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 TSPAN13O95857 204 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 TMEM256Q8N2U0 113 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 TNFRSF14Q92956 283 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 IGKV1D-42A0A075B6H8 117 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 FAM90A26D6RGX4 464 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 IGHV1-8P0DP01 117 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 ATP5IP56385 69 aaPredicted RBP7.13□□□□□ -1.27
CD47-204ENST00000471694 NDPQ00604 133 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 MDS2Q8NDY4 140 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 SIGLEC5O15389 551 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 DMRTA1Q5VZB9 504 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 PVRIGQ6DKI7 326 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 KLK5Q9Y337 293 aaPredicted RBP7.13□□□□□ -1.27
CD47-204ENST00000471694 DNAJC13O75165 2243 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 CACNA1CQ13936 2221 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 MDC1Q14676 2089 aaKnown RBP7.13□□□□□ -1.27
CD47-204ENST00000471694 FHITP49789 147 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 SPSB3Q6PJ21 355 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 SCGB3A1Q96QR1 104 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 KCNE5Q9UJ90 142 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 FUT9Q9Y231 359 aa7.13□□□□□ -1.27
CD47-204ENST00000471694 XIRP1Q702N8 1843 aaKnown RBP7.13□□□□□ -1.27
CD47-204ENST00000471694 IGHV1-69DA0A0B4J2H0 117 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 A6NDN8 102 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 IGHV1-69P01742 117 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 FUT5Q11128 374 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 C15orf61A6NNL5 157 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 FCN3O75636 299 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 XAF1Q6GPH4 301 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 UQCC3Q6UW78 93 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 M0R143 59 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 IGFBP2P18065 325 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 SERF2P84101 59 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 RNF125Q96EQ8 232 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 IGHV1-3A0A0C4DH29 117 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 C17orf98A8MV24 154 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 OOSP1A8MZH6 123 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 PSG1P11464 419 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 IFI27P40305 119 aaPredicted RBP7.12□□□□□ -1.27
CD47-204ENST00000471694 RPL36AP83881 106 aaKnown RBP7.12□□□□□ -1.27
CD47-204ENST00000471694 RPL36ALQ969Q0 106 aaKnown RBP7.12□□□□□ -1.27
CD47-204ENST00000471694 VCX2Q9H322 139 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 TMEM160Q9NX00 188 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 RPUSD1Q9UJJ7 312 aaKnown RBP7.12□□□□□ -1.27
CD47-204ENST00000471694 CD28P10747 220 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 SLC25A38Q96DW6 304 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 TXNDC17Q9BRA2 123 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 NIT2Q9NQR4 276 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 TRAV12-3A0A0B4J271 114 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 APOMO95445 188 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 HOXA5P20719 270 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 LINC00158P58513 81 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 ZNF79Q15937 498 aa7.12□□□□□ -1.27
CD47-204ENST00000471694 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
CD47-204ENST00000471694 TGFBR3LH3BV60 316 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 FBLIM1Q8WUP2 373 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 C12orf57Q99622 126 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 Q9H3A6 140 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 SMIM18P0DKX4 95 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 FAM24BQ8N5W8 94 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 EFNA2O43921 213 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 SPNP16150 400 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 MST1LQ2TV78 715 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 A0A0G2JMZ2 1700 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 LRRC37A2A6NM11 1700 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 UPK2O00526 184 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 YPEL1O60688 119 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 DEFB131AP59861 70 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 EGR4Q05215 589 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 YPEL2Q96QA6 119 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 BRWD1Q9NSI6 2320 aa7.11□□□□□ -1.27
CD47-204ENST00000471694 UCP1P25874 307 aa7.1□□□□□ -1.27
CD47-204ENST00000471694 TMEM155Q4W5P6 130 aa7.1□□□□□ -1.27
CD47-204ENST00000471694 VAX1Q5SQQ9 334 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms