RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TMBIM4Q9HC24 238 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 IFT46Q9NQC8 304 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SLC2A9Q9NRM0 540 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 PSME2Q9UL46 239 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TNRC6AQ8NDV7 1962 aaKnown RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CHD5Q8TDI0 1954 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 ABCB11O95342 1321 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TMEM2Q9UHN6 1383 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 FHAD1B1AJZ9 1412 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SCAPERQ9BY12 1400 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 ERICH3Q5RHP9 1530 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 PIK3C2BO00750 1634 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 E9PCH4 1651 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 USP54Q70EL1 1684 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 RICTORQ6R327 1708 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MON2Q7Z3U7 1717 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 NRXN2Q9P2S2 1712 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 GSTTP1A0A1W2PQM5 241 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TRAPPC13A5PLN9 417 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 GOLGA8IPA6NC78 632 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 IGLV3-27P01718 113 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SERPINA7P05543 415 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CRYBA1P05813 215 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CRYGCP07315 174 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MT1BP07438 61 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 STAG3L2P0CL84 134 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 IFNGR2P38484 337 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 RPL27AP46776 148 aaKnown RBP0.01□□□□□ -2.41
UBXN4-207ENST00000471246 EVX1P49640 407 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 DAPP51397 102 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 RBM11P57052 281 aaKnown RBP0.01□□□□□ -2.41
UBXN4-207ENST00000471246 VSNL1P62760 191 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 GTF2BQ00403 316 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TBC1D28Q2M2D7 210 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 LRRC75BQ2VPJ9 315 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ZNF705AQ6ZN79 300 aaPredicted RBP0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SMIM5Q71RC9 77 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SSX6Q7RTT6 188 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 KTN1-AS1Q86SY8 53 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PLCZ1Q86YW0 608 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 KRTAP8-1Q8IUC2 63 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PDCL2Q8N4E4 241 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ST6GALNAC3Q8NDV1 305 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CCDC112Q8NEF3 446 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 RPS4Y2Q8TD47 263 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ZNF418Q8TF45 676 aaPredicted RBP0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MBD3L1Q8WWY6 194 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 OR51B6Q9H340 312 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TAAR3PQ9P1P4 343 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PCYT1BQ9Y5K3 369 aaPredicted RBP0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SNURFQ9Y675 71 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PIK3R4Q99570 1358 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 DAPK1P53355 1430 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PRXQ9BXM0 1461 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TRPM1Q7Z4N2 1603 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PTPN23Q9H3S7 1636 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 C4AP0C0L4 1744 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 DDX60Q8IY21 1712 aaKnown RBP0.01□□□□□ -2.41
UBXN4-207ENST00000471246 KIAA1551Q9HCM1 1747 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PLXNA4Q9HCM2 1894 aa0.01□□□□□ -2.41
UBXN4-207ENST00000471246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 IGHV1-18A0A0C4DH31 117 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 HMSDA8MTL9 139 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 MKRN2OSH3BPM6 223 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 TXNDC9O14530 226 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 GPR171O14626 319 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 GEMIN2O14893 280 aaKnown RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 KLRC4O43908 158 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 OBSL1O75147 1896 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 NDUFB2O95178 105 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 PSMG1O95456 288 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 NPYP01303 97 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 MT1FP04733 61 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 CCNOP22674 350 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 RPS12P25398 132 aaKnown RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 RCVRNP35243 200 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 AQP4P55087 323 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 UBE2KP61086 200 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 MGAT3Q09327 533 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 PRDM2Q13029 1718 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 ROCK1Q13464 1354 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 NCOA2Q15596 1464 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 ZNHIT3Q15649 155 aaPredicted RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 FER1L6Q2WGJ9 1857 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 BSXQ3C1V8 233 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 ARHGAP11BQ3KRB8 267 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 C6orf52Q5T4I8 152 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 CDC42BPAQ5VT25 1732 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 ECM29Q5VYK3 1845 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 SPATA31B1PQ5VZV4 182 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 CDC42BPGQ6DT37 1551 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 LYZL1Q6UWQ5 148 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 EML6Q6ZMW3 1958 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 SPATA12Q7Z6I5 190 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 SBSPONQ8IVN8 264 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 DYNAPQ8N1N2 210 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 DAND5Q8N907 189 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 C9orf163Q8N9P6 203 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 OR2D3Q8NGH3 330 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 OR1L8Q8NGR8 309 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms