RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 CITED1Q99966 193 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 VGLL1Q99990 258 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 UFC1Q9Y3C8 167 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 KMT2EQ8IZD2 1858 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 BRWD1Q9NSI6 2320 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 SMIM27A0A1W2PRY6 76 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 PMS2P5A8MQ11 134 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 K7ERJ3 54 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 REG1BP48304 166 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 INSL3P51460 131 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 TRIP6Q15654 476 aaKnown RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 RHBDD2Q6NTF9 364 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 AMTNQ6UX39 209 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 SYT8Q8NBV8 401 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 LINC00479Q96M42 142 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 C20orf78Q9BR46 151 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 GGTLC1Q9BX51 225 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 HIF1ANQ9NWT6 349 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 NHP2Q9NX24 153 aaKnown RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 CYSLTR1Q9Y271 337 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 LY96Q9Y6Y9 160 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 DOCK7Q96N67 2140 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 PRR19A6NJB7 356 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 K7EMI3 77 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 CRXO43186 299 aaPredicted RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 PAX4O43316 350 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 EFNA2O43921 213 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 IGLV1-40P01703 118 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 IGHV3-7P01780 117 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 IGKV3-11P04433 115 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 SP9P0CG40 484 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 PPIFP30405 207 aaKnown RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 OPRK1P41145 380 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 FASLGP48023 281 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 GAGE5Q13069 117 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 GAGE6Q13070 117 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 KLF5Q13887 457 aaPredicted RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 EFNB3Q15768 340 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 C3AR1Q16581 482 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 TMEM249Q2WGJ8 235 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 C2orf27AQ580R0 203 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 MIR17HGQ75NE6 70 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 ZNF418Q8TF45 676 aaPredicted RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 SNRNP40Q96DI7 357 aaKnown RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 HSD17B10Q99714 261 aaKnown RBP3.49□□□□□ -1.85
VPS50-210ENST00000471188 MGST2Q99735 147 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 SPATA25Q9BR10 227 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 FAM234AQ9H0X4 552 aa3.49□□□□□ -1.85
VPS50-210ENST00000471188 IGHV3-64DA0A0J9YX35 117 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 C15orf62A8K5M9 175 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 A8MWL6 223 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 SIVA1O15304 175 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 KLK10O43240 276 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 FAM87AP0C7U9 286 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CT45A6P0DMU7 189 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CT45A5P0DMU8 189 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CT45A7P0DMV0 189 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 B4GALT1P15291 398 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 ZNF32P17041 273 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 FCER1GP30273 86 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 GPR12P47775 334 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 FGF12P61328 243 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CATR1Q13166 79 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CT45A1Q5HYN5 189 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 SPATA46Q5T0L3 261 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 ABHD12Q8N2K0 398 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CT45A3Q8NHU0 189 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 BADQ92934 168 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 C11orf52Q96A22 123 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 URB1-AS1Q96HZ7 61 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 SPANXB1Q9NS25 103 aaPredicted RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 THADAQ6YHU6 1953 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 PTPRSQ13332 1948 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 TMEM189A5PLL7 270 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 OR11H12B2RN74 326 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 MPDU1O75352 247 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 APOMO95445 188 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 TSPAN13O95857 204 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 MT-ATP8P03928 68 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 NTF4P34130 210 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CSN1S1P47710 185 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 LINC00205P59089 165 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 FAM120AOSQ5T036 256 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 BCL6BQ8N143 479 aaPredicted RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 ZADH2Q8N4Q0 377 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 OR11H1Q8NG94 326 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 OR11H2Q8NH07 326 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 PRSS3P2Q8NHM4 247 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 GALMQ96C23 342 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 PGLYRP4Q96LB8 373 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 FAM173AQ9BQD7 235 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 TMEM167BQ9NRX6 74 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 JPT1Q9UK76 154 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 ASXL3Q9C0F0 2248 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 C17orf98A8MV24 154 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 F8W1H4 67 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 SMAD7O15105 426 aaKnown RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 SYNGR1O43759 233 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms