RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TNXAQ16473 311 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 LRRC37A5PQ49AS3 106 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 ZNF562Q6V9R5 426 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 HSD17B13Q7Z5P4 300 aaPredicted RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 OR1N2Q8NGR9 330 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 THAP6Q8TBB0 222 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 WDR89Q96FK6 387 aaPredicted RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 CIB3Q96Q77 187 aaPredicted RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 RAB40CQ96S21 281 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 CLCC1Q96S66 551 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 GNB4Q9HAV0 340 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 PLEKHA3Q9HB20 300 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 ENY2Q9NPA8 101 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 NDUFA4L2Q9NRX3 87 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 LSM5Q9Y4Y9 91 aaKnown RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 BIRC6Q9NR09 4857 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 TRAV14DV4A0A0A6YYC5 116 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 A0A1W2PN81 502 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 CEBPZOSA8MTT3 80 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 INS-IGF2F8WCM5 200 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 FCN1O00602 326 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 SSSCA1O60232 199 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 NXPH3O95157 252 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 CNIH1O95406 144 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 FRMD6-AS1P0C7T7 363 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 SLC25A4P12235 298 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 LYL1P12980 280 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 CHRNA7P36544 502 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 HOXA1P49639 335 aaPredicted RBP6.99□□□□□ -1.29
SF3A1-206ENST00000471037 TAS2R30P59541 319 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 POLR2GP62487 172 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3A1-206ENST00000471037 GNB1P62873 340 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 CX3CL1P78423 397 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 FXYD3Q14802 87 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 PRSS54Q6PEW0 395 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 TMEM65Q6PI78 240 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 SRSF12Q8WXF0 261 aaKnown RBP6.99□□□□□ -1.29
SF3A1-206ENST00000471037 ARPC1AQ92747 370 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 PPP1R14BQ96C90 147 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 CITED4Q96RK1 184 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 MAGT1Q9H0U3 335 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 KLK15Q9H2R5 256 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 RBKSQ9H477 322 aa6.99□□□□□ -1.29
SF3A1-206ENST00000471037 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
SF3A1-206ENST00000471037 IGHV7-81A0A0B4J1V7 117 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 E5RGE8 158 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 G3V318 75 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 G3V3Q6 166 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 L7N2F9 121 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 OVOL1O14753 267 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 TSC22D2O75157 780 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 SAP30O75446 220 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 C1QBP02746 253 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 MYOD1P15172 320 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 RAB9AP51151 201 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 VAMP2P63027 116 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 SSBP2P81877 361 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-206ENST00000471037 ERHP84090 104 aaKnown RBP6.98□□□□□ -1.29
SF3A1-206ENST00000471037 CD300CQ08708 224 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 ZFP69Q49AA0 526 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 C10orf55Q5SWW7 151 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 DTD1Q8TEA8 209 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 DCUN1D4Q92564 292 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 SMIM8Q96KF7 97 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 RNF126Q9BV68 326 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 HINT2Q9BX68 163 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 HIPK2Q9H2X6 1198 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 C11orf1Q9H5F2 150 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 ZMAT4Q9H898 229 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 MBD2Q9UBB5 411 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 WSB1Q9Y6I7 421 aa6.98□□□□□ -1.29
SF3A1-206ENST00000471037 TRAV41A0A0B4J266 112 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 IGLC7A0M8Q6 106 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 CGB1A6NKQ9 187 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 TEX22C9J3V5 150 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 H0YIZ8 118 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 SMLR1H3BR10 107 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 SCAF4O95104 1147 aaKnown RBP6.97□□□□□ -1.29
SF3A1-206ENST00000471037 IAPPP10997 89 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 GP9P14770 177 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 P2RY1P47900 373 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 CRIP2P52943 208 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-206ENST00000471037 ATP5IP56385 69 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-206ENST00000471037 RPP30P78346 268 aaKnown RBP6.97□□□□□ -1.29
SF3A1-206ENST00000471037 NDPQ00604 133 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 C19orf54Q5BKX5 351 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 Q5BKY6 102 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 SPINK9Q5DT21 86 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 ACSM6Q6P461 480 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 GRPEL2Q8TAA5 225 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 ABHD5Q8WTS1 349 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 DLX4Q92988 240 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-206ENST00000471037 HYLS1Q96M11 299 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 OR5B12Q96R08 314 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 TM2D3Q9BRN9 247 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 HEYLQ9NQ87 328 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-206ENST00000471037 PSENENQ9NZ42 101 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms