RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 CCDC140Q96MF4 163 aa8.29□□□□□ -1.08
RFTN1-208ENST00000470458 GINS3Q9BRX5 216 aa8.29□□□□□ -1.08
RFTN1-208ENST00000470458 ZNF436Q9C0F3 470 aaPredicted RBP8.29□□□□□ -1.08
RFTN1-208ENST00000470458 RBM38Q9H0Z9 239 aaKnown RBP8.29□□□□□ -1.08
RFTN1-208ENST00000470458 TUBA4BQ9H853 241 aa8.29□□□□□ -1.08
RFTN1-208ENST00000470458 DAZ1Q9NQZ3 744 aaKnown RBP8.29□□□□□ -1.08
RFTN1-208ENST00000470458 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
RFTN1-208ENST00000470458 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 C15orf62A8K5M9 175 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 ST8SIA3O43173 380 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 GNG7O60262 68 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 IGKV1-39P01597 117 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 IGKV1-5P01602 117 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 TRBV12-3P01733 135 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 HLA-AP01891 365 aaKnown RBP8.28□□□□□ -1.08
RFTN1-208ENST00000470458 IGKV1D-39P04432 117 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 SULT1A3P0DMM9 295 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 SULT1A4P0DMN0 295 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 AKR1C4P17516 323 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 GPR183P32249 361 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 KLF9Q13886 244 aaPredicted RBP8.28□□□□□ -1.08
RFTN1-208ENST00000470458 RBMS2Q15434 407 aaKnown RBP8.28□□□□□ -1.08
RFTN1-208ENST00000470458 DEFB114Q30KQ6 69 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 SP6Q3SY56 376 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 TMEM268Q5VZI3 342 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 IL34Q6ZMJ4 242 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 SELENOHQ8IZQ5 122 aaKnown RBP8.28□□□□□ -1.08
RFTN1-208ENST00000470458 MISP3Q96FF7 219 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
RFTN1-208ENST00000470458 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
RFTN1-208ENST00000470458 TGP01266 2768 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 A0A0B4J293 547 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 A0A1B0GU03 582 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 OR2T8A6NH00 312 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 MED6O75586 246 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 P0C879 139 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 C8orf88P0DMB2 117 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 SLC25A6P12236 298 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 RPP30P78346 268 aaKnown RBP8.27□□□□□ -1.09
RFTN1-208ENST00000470458 UBAC2Q8NBM4 344 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
RFTN1-208ENST00000470458 NARS2Q96I59 477 aaKnown RBP8.27□□□□□ -1.09
RFTN1-208ENST00000470458 TMEM231Q9H6L2 316 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 DMRT1Q9Y5R6 373 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 U3KQ87 197 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 U3KQK5 164 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 V9GYH0 126 aa8.27□□□□□ -1.09
RFTN1-208ENST00000470458 A0A1W2PS18 150 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 MFSD2BA6NFX1 497 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 CEBPZOSA8MTT3 80 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 SLC25A4P12235 298 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 PAFAH1B2P68402 229 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 SMCO1Q147U7 214 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 CD300EQ496F6 205 aaPredicted RBP8.26□□□□□ -1.09
RFTN1-208ENST00000470458 FAAP20Q6NZ36 180 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 UXS1Q8NBZ7 420 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 TMEM190Q8WZ59 177 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 TRIM63Q969Q1 353 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 PINX1Q96BK5 328 aaKnown RBP8.26□□□□□ -1.09
RFTN1-208ENST00000470458 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 CIB3Q96Q77 187 aaPredicted RBP8.26□□□□□ -1.09
RFTN1-208ENST00000470458 TMED3Q9Y3Q3 217 aa8.26□□□□□ -1.09
RFTN1-208ENST00000470458 FAM90A26D6RGX4 464 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 I3L2K1 104 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 K7EIM0 57 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 MT-CO2P00403 227 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 FABP1P07148 127 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 S100A7P31151 101 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 OPRK1P41145 380 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 EIF2B2P49770 351 aaKnown RBP8.25□□□□□ -1.09
RFTN1-208ENST00000470458 DEFA5Q01523 94 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 TMEM187Q14656 261 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 GUCA2BQ16661 112 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 PVRIGQ6DKI7 326 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 TMED4Q7Z7H5 227 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 CENPSQ8N2Z9 138 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 LRTM2Q8N967 370 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 S100ZQ8WXG8 99 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
RFTN1-208ENST00000470458 CACNG5Q9UF02 275 aa8.25□□□□□ -1.09
RFTN1-208ENST00000470458 TRAV14DV4A0A0A6YYC5 116 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 TMEM213A2RRL7 107 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 OR4C46A6NHA9 309 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 DBX1A6NMT0 343 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 YIF1AO95070 293 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 IFNA21P01568 189 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 CTSGP08311 255 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 FRMD6-AS1P0C7T7 363 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 VAMP1P23763 118 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 CD81P60033 236 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 ZNF79Q15937 498 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 C2orf83Q53S99 150 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 NMSQ5H8A3 153 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 ZNF600Q6ZNG1 722 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 OR4X1Q8NH49 305 aa8.24□□□□□ -1.09
RFTN1-208ENST00000470458 OR1S1Q8NH92 325 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms