RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 MISP3Q96FF7 219 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 PLEKHA2Q9HB19 425 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 PUS1Q9Y606 427 aaKnown RBP eCLIP8.41□□□□□ -1.06
LSM2-209ENST00000470083 HELTA6NFD8 242 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 H3BMM0 161 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 MT-CO2P00403 227 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 NPPCP23582 126 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 GNRHRP30968 328 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 P2RY1P47900 373 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 TTC32Q5I0X7 151 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 OGFRL1Q5TC84 451 aaPredicted RBP8.4□□□□□ -1.06
LSM2-209ENST00000470083 CNIH2Q6PI25 160 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 ZNF600Q6ZNG1 722 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 NANOGP1Q8N7R0 232 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 ZNF555Q8NEP9 628 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 COMMD9Q9P000 198 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 MDFICQ9P1T7 246 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 LINC00588Q9Y4M8 146 aa8.4□□□□□ -1.06
LSM2-209ENST00000470083 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 ALDH3B2P48448 385 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 ERVK-16P61578 105 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 DAD1P61803 113 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 CATR1Q13166 79 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 SERTAD4-AS1Q5TG53 156 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 ZBTB34Q8NCN2 500 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 SECTM1Q8WVN6 248 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 ELF5Q9UKW6 265 aaPredicted RBP8.39□□□□□ -1.07
LSM2-209ENST00000470083 YTHDF2Q9Y5A9 579 aaKnown RBP8.39□□□□□ -1.07
LSM2-209ENST00000470083 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
LSM2-209ENST00000470083 A0A1B0GU03 582 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 MARCH11A6NNE9 402 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 ATP8B1O43520 1251 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 CIB2O75838 187 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 CRYBB3P26998 211 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 DHRS2Q13268 280 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 ARL6IP1Q15041 203 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 CDPF1Q6NVV7 123 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 ZFP1Q6P2D0 407 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 Q6ZSN1 163 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 MOB3AQ96BX8 217 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 METTL26Q96S19 204 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 Q9H3A6 140 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 Q9H8V8 135 aa8.38□□□□□ -1.07
LSM2-209ENST00000470083 RPS10-NUDT3A0A1W2PQS6 291 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 ARL6IP5O75915 188 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 NUDT3O95989 172 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 HLA-DRB4P13762 266 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 RAB6AP20340 208 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 NPBWR1P48145 328 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 EIF2B2P49770 351 aaKnown RBP8.37□□□□□ -1.07
LSM2-209ENST00000470083 SNRPD3P62318 126 aaKnown RBP8.37□□□□□ -1.07
LSM2-209ENST00000470083 HES5Q5TA89 166 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 TMEM91Q6ZNR0 172 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 CADM3Q8N126 398 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 SYT8Q8NBV8 401 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 ZNF114Q8NC26 417 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 OR13F1Q8NGS4 319 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 OR51H1Q8NH63 302 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 TMEM203Q969S6 136 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 PSORS1C1Q9UIG5 152 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 ANXA10Q9UJ72 324 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 NSG2Q9Y328 171 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 V9GY05 133 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 HLA-DRB4X5D2U9 266 aa8.37□□□□□ -1.07
LSM2-209ENST00000470083 LOC102723971A0A1B0GUV8 181 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 METTL21EPA6NDL7 271 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 SNAPC5O75971 98 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 HBE1P02100 147 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 SMR3BP02814 79 aaPredicted RBP8.36□□□□□ -1.07
LSM2-209ENST00000470083 RASSF2P50749 326 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 DLK1P80370 383 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 HACD4Q5VWC8 232 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 PINX1Q96BK5 328 aaKnown RBP8.36□□□□□ -1.07
LSM2-209ENST00000470083 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
LSM2-209ENST00000470083 MND1Q9BWT6 205 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 SEPSECSQ9HD40 501 aaKnown RBP8.36□□□□□ -1.07
LSM2-209ENST00000470083 FKBP11Q9NYL4 201 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 PRNDQ9UKY0 176 aa8.36□□□□□ -1.07
LSM2-209ENST00000470083 A0A1W2PPQ1 181 aa8.35□□□□□ -1.07
LSM2-209ENST00000470083 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
LSM2-209ENST00000470083 FAM90A26D6RGX4 464 aa8.35□□□□□ -1.07
LSM2-209ENST00000470083 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
LSM2-209ENST00000470083 ARPC4P59998 168 aa8.35□□□□□ -1.07
LSM2-209ENST00000470083 USF2Q15853 346 aaPredicted RBP8.35□□□□□ -1.07
LSM2-209ENST00000470083 CDNFQ49AH0 187 aa8.35□□□□□ -1.07
LSM2-209ENST00000470083 AADACL3Q5VUY0 350 aa8.35□□□□□ -1.07
LSM2-209ENST00000470083 SLC5A7Q9GZV3 580 aa8.35□□□□□ -1.07
LSM2-209ENST00000470083 DBX1A6NMT0 343 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 TMEM50AO95807 157 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms