RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 NPFFR1Q9GZQ6 430 aa6.4□□□□□ -1.38
NPHP3-204ENST00000469232 ARV1Q9H2C2 271 aa6.4□□□□□ -1.38
NPHP3-204ENST00000469232 CYTL1Q9NRR1 136 aa6.4□□□□□ -1.38
NPHP3-204ENST00000469232 IGLV11-55A0A075B6I3 123 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 TMEM89A2RUT3 159 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 H3BUA1 57 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 AP4M1O00189 453 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 TAAR5O14804 337 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 CNIH1O95406 144 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 OPN1MWP04001 364 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 OPN1MW2P0DN77 364 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 OPN1MW3P0DN78 364 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 S100A11P31949 105 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 GPX4P36969 197 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 EIF2B2P49770 351 aaKnown RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 SUB1P53999 127 aaKnown RBP eCLIP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 UBA52P62987 128 aaKnown RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 ATP6V1FQ16864 119 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 RBMS3Q6XE24 437 aaKnown RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 TMUB2Q71RG4 321 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 RNF152Q8N8N0 203 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 INO80EQ8NBZ0 244 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 GRPEL2Q8TAA5 225 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 CACNG8Q8WXS5 425 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 BSCL2Q96G97 398 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 JMJD8Q96S16 334 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 PARD6GQ9BYG4 376 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 C16orf95Q9H693 158 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 ENY2Q9NPA8 101 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 BCL2L11O43521 198 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 SOX15O60248 233 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 NDUFA7O95182 113 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 FCGR2BP31994 310 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 CAV2P51636 162 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 NKX2-5P52952 324 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 RAB11AP62491 216 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 DLK1P80370 383 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 NHLH2Q02577 135 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 TMEM267Q0VDI3 215 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-204ENST00000469232 SPANXN5Q5MJ07 72 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 SLC35E3Q7Z769 313 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 STX12Q86Y82 276 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 LFNGQ8NES3 379 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 MYOZ3Q8TDC0 251 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 ATP6V0BQ99437 205 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 PRSS22Q9GZN4 317 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 WNT10AQ9GZT5 417 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 WFDC1Q9HC57 220 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 SERTAD4Q9NUC0 356 aa6.39□□□□□ -1.39
NPHP3-204ENST00000469232 TRAV41A0A0B4J266 112 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 SH2D7A6NKC9 451 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 H3BP45 60 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 I3L2K1 104 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 CORTO00230 105 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 CST7O76096 145 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 IFNA10P01566 189 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 IGHG4P01861 327 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 METTL15P1P0C7V9 234 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 HIST1H1BP16401 226 aaKnown RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 NUP62P37198 522 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 SNCAP37840 140 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 GNB1P62873 340 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 CD69Q07108 199 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 EXOSC2Q13868 293 aaKnown RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 ETV3LQ6ZN32 361 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 Q6ZSV7 163 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 CENPVQ7Z7K6 275 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 STOML3Q8TAV4 291 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 PINX1Q96BK5 328 aaKnown RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 FAM103A1Q9BTL3 118 aaKnown RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 HINT2Q9BX68 163 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 FNDC4Q9H6D8 234 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 FBXL17Q9UF56 701 aa6.38□□□□□ -1.39
NPHP3-204ENST00000469232 LSM4Q9Y4Z0 139 aaKnown RBP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
NPHP3-204ENST00000469232 TRIM77I1YAP6 450 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 K7EIM0 57 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 OR8U8P0C7N1 319 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 C4BPBP20851 252 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 HBG1P69891 147 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 HBG2P69892 147 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 OPCMLQ14982 345 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 TMEM116Q8NCL8 245 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 OR10P1Q8NGE3 313 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 OR1S2Q8NGQ3 325 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 ARPC5LQ9BPX5 153 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 PARP11Q9NR21 331 aa6.37□□□□□ -1.39
NPHP3-204ENST00000469232 G3V318 75 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 DFFBO76075 338 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 SLC38A11Q08AI6 406 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 KIAA0141Q14154 515 aaPredicted RBP6.36□□□□□ -1.39
NPHP3-204ENST00000469232 UNQ5815/PRO19632Q6UWF5 114 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 Q71RC1 249 aaPredicted RBP6.36□□□□□ -1.39
NPHP3-204ENST00000469232 SLC51BQ86UW2 128 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 THAP8Q8NA92 274 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 VN1R17PQ8TDU5 208 aa6.36□□□□□ -1.39
NPHP3-204ENST00000469232 ATP5SQ99766 215 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms