RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 LINC01006Q8NI28 216 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 PINX1Q96BK5 328 aaKnown RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 WNT10AQ9GZT5 417 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 SLC25A31Q9H0C2 315 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 SLA2Q9H6Q3 261 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 RANGRFQ9HD47 186 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 MBD2Q9UBB5 411 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 F11RQ9Y624 299 aaKnown RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 A0A0G2JLM5 398 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 A0A1B0GW64 132 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 SMCO3A2RU48 225 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 CGB1A6NKQ9 187 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 FAM223BA6NKX1 122 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 NUDT19A8MXV4 375 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 OR2J3O76001 311 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 PRH1P02810 166 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 ELANEP08246 267 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 EGR2P11161 476 aaPredicted RBP6.37□□□□□ -1.39
HDAC6-216ENST00000468949 CTRB1P17538 263 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 P2RY1P47900 373 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 SRSF4Q08170 494 aaKnown RBP6.37□□□□□ -1.39
HDAC6-216ENST00000468949 FOXE3Q13461 319 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 C2orf83Q53S99 150 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 CTRB2Q6GPI1 263 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 OR8G2PQ6IF36 304 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 ETFRF1Q6IPR1 90 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 C11orf87Q6NUJ2 197 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 ETV3LQ6ZN32 361 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 FAM223AQ8IWN6 122 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 OR5AU1Q8NGC0 362 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 RNASEH2CQ8TDP1 164 aaKnown RBP6.37□□□□□ -1.39
HDAC6-216ENST00000468949 TAF15Q92804 592 aaKnown RBP eCLIP6.37□□□□□ -1.395e-10■□□□□ 10.5
HDAC6-216ENST00000468949 SLC35E1Q96K37 410 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 SMIM8Q96KF7 97 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 MS4A10Q96PG2 267 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 P2RX4Q99571 388 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 LYRM2Q9NU23 88 aaPredicted RBP6.37□□□□□ -1.39
HDAC6-216ENST00000468949 SERTAD4Q9NUC0 356 aa6.37□□□□□ -1.39
HDAC6-216ENST00000468949 TCRBV4S1A1TA0A5B7 111 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 TMEM89A2RUT3 159 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 IGHG4P01861 327 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 CRYGCP07315 174 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 METTL15P1P0C7V9 234 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 RNASE2P10153 161 aaKnown RBP6.36□□□□□ -1.39
HDAC6-216ENST00000468949 RHOGP84095 191 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 AKR1C1Q04828 323 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 ATP5G2Q06055 141 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 BAXQ07812 192 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 ZFP69Q49AA0 526 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 ASPHD1Q5U4P2 390 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 TCTE3Q8IZS6 198 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 UBAC2Q8NBM4 344 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 NECAP1Q8NC96 275 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 OR10P1Q8NGE3 313 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 CHAC2Q8WUX2 184 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 EEF1AKMT3Q96AZ1 226 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 WDR89Q96FK6 387 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-216ENST00000468949 USMG5Q96IX5 58 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 CXorf58Q96LI9 332 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 OR5AC2Q9NZP5 309 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 FBXL7Q9UJT9 491 aa6.36□□□□□ -1.39
HDAC6-216ENST00000468949 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 FAM24AA6NFZ4 105 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 C15orf62A8K5M9 175 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 SMLR1H3BR10 107 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 ARPC5O15511 151 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 MT-CO2P00403 227 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 SLC25A4P12235 298 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 RPL12P30050 165 aaKnown RBP6.35□□□□□ -1.39
HDAC6-216ENST00000468949 PPIFP30405 207 aaKnown RBP6.35□□□□□ -1.39
HDAC6-216ENST00000468949 SULT1A1P50225 295 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 RAB9AP51151 201 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 DEFA5Q01523 94 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 CFHR3Q02985 330 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 SLC38A11Q08AI6 406 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 IL15RAQ13261 267 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 C15orf32Q32M92 178 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 Q56UQ5 140 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 AWAT1Q58HT5 328 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 FAM209BQ5JX69 171 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 ACSM6Q6P461 480 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 C19orf35Q6ZS72 473 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 SLC16A13Q7RTY0 426 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 ZNF546Q86UE3 836 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 TMEM217Q8N7C4 229 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 C3orf56Q8N813 242 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 C11orf44Q8N8P7 122 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 OR1S2Q8NGQ3 325 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 OR4C12Q96R67 309 aa6.35□□□□□ -1.39
HDAC6-216ENST00000468949 GAR1Q9NY12 217 aaKnown RBP6.35□□□□□ -1.39
HDAC6-216ENST00000468949 ANK2Q01484 3957 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 IGLV11-55A0A075B6I3 123 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 TRAV14DV4A0A0A6YYC5 116 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 TRBV7-1A0A0A6YYK4 115 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 IGHV3-21A0A0B4J1V1 117 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 SOX15O60248 233 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 GNG7O60262 68 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 CST7O76096 145 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 IGLV1-40P01703 118 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 PSMB8P28062 276 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms