RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ST8SIA2Q92186 375 aa13.77□□□□□ -0.21
RPL39-202ENST00000468844 SLC25A32Q9H2D1 315 aa13.77□□□□□ -0.21
RPL39-202ENST00000468844 PMS2P5A8MQ11 134 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 RNASE1P07998 156 aaKnown RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 CRIP2P52943 208 aaPredicted RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 BSCL2Q96G97 398 aaPredicted RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 LINC00052Q96N35 136 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 ZNF702PQ9H963 129 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 KRBOX1C9JBD0 128 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 SULT1A1P50225 295 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 MFAP2P55001 183 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 AKIRIN2Q53H80 203 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 C2orf83Q53S99 150 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 HAPLN4Q86UW8 402 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 STX12Q86Y82 276 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 EIF4E3Q8N5X7 224 aaKnown RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 NOL4LQ96MY1 436 aaPredicted RBP13.76□□□□□ -0.21
RPL39-202ENST00000468844 SLC25A31Q9H0C2 315 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 DMRT1Q9Y5R6 373 aa13.76□□□□□ -0.21
RPL39-202ENST00000468844 KANTRA0A1W2PQU2 76 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 NPIPB5A8MRT5 1133 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 BCL2L11O43521 198 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 FBXO24O75426 580 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 CRYGCP07315 174 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
RPL39-202ENST00000468844 ARL16Q0P5N6 197 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 C19orf54Q5BKX5 351 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 OR8G2PQ6IF36 304 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 UNQ5815/PRO19632Q6UWF5 114 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 TTC9CQ8N5M4 171 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPL39-202ENST00000468844 PRSS22Q9GZN4 317 aa13.75□□□□□ -0.21
RPL39-202ENST00000468844 F11RQ9Y624 299 aaKnown RBP13.75□□□□□ -0.21
RPL39-202ENST00000468844 AP4M1O00189 453 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 OR8U8P0C7N1 319 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 BAXQ07812 192 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 OR1P1Q8NH06 330 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 ZC4H2Q9NQZ6 224 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 TRAV41A0A0B4J266 112 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 PRSS46E5RG02 174 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 RAB11AP62491 216 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 OR5T1Q8NG75 326 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 OR5C1Q8NGR4 320 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
RPL39-202ENST00000468844 LOC105371267A0A1B0GV96 52 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 SOX15O60248 233 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 PRH1P02810 166 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 IFNA4P05014 189 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 ATP5IP56385 69 aaPredicted RBP13.73□□□□□ -0.21
RPL39-202ENST00000468844 PVRIGQ6DKI7 326 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 ETV3LQ6ZN32 361 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 Q8N2B8 174 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 TMEM68Q96MH6 324 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 FBXL17Q9UF56 701 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 TENM1Q9UKZ4 2725 aa13.73□□□□□ -0.21
RPL39-202ENST00000468844 TCF21O43680 179 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 DEFA4P12838 97 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 SUB1P53999 127 aaKnown RBP eCLIP13.72□□□□□ -0.216e-17■■■■□ 23.4
RPL39-202ENST00000468844 Q6ZSV7 163 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 STPG2Q8N412 459 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 FAM110DQ8TAY7 271 aaPredicted RBP13.72□□□□□ -0.21
RPL39-202ENST00000468844 PHYHIPLQ96FC7 376 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 SMIM3Q9BZL3 60 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 PPIFP30405 207 aaKnown RBP13.72□□□□□ -0.21
RPL39-202ENST00000468844 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
RPL39-202ENST00000468844 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
RPL39-202ENST00000468844 OR10P1Q8NGE3 313 aa13.71□□□□□ -0.21
RPL39-202ENST00000468844 ZNF471Q9BX82 626 aaPredicted RBP13.71□□□□□ -0.21
RPL39-202ENST00000468844 IGLV11-55A0A075B6I3 123 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 TEX46H3BTG2 121 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 HBG1P69891 147 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 HBG2P69892 147 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 CFHR3Q02985 330 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 SLC38A11Q08AI6 406 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 CLINT1Q14677 625 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 ARSJQ5FYB0 599 aaPredicted RBP13.7□□□□□ -0.22
RPL39-202ENST00000468844 SLC25A24Q6NUK1 477 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
RPL39-202ENST00000468844 TSPAN9O75954 239 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
RPL39-202ENST00000468844 FAM74A1Q5RGS3 127 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.7□□□□□ -0.22
RPL39-202ENST00000468844 OR1S2Q8NGQ3 325 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 PINX1Q96BK5 328 aaKnown RBP13.7□□□□□ -0.22
RPL39-202ENST00000468844 SERTAD4Q9NUC0 356 aa13.7□□□□□ -0.22
RPL39-202ENST00000468844 OPRK1P41145 380 aa13.69□□□□□ -0.22
RPL39-202ENST00000468844 MLANAQ16655 118 aa13.69□□□□□ -0.22
RPL39-202ENST00000468844 LILRB2Q8N423 598 aa13.69□□□□□ -0.22
RPL39-202ENST00000468844 RNASEH2CQ8TDP1 164 aaKnown RBP13.69□□□□□ -0.22
RPL39-202ENST00000468844 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
RPL39-202ENST00000468844 ARPC5LQ9BPX5 153 aa13.69□□□□□ -0.22
RPL39-202ENST00000468844 WFDC1Q9HC57 220 aa13.69□□□□□ -0.22
RPL39-202ENST00000468844 DEFA5Q01523 94 aa13.68□□□□□ -0.22
RPL39-202ENST00000468844 CD69Q07108 199 aa13.68□□□□□ -0.22
RPL39-202ENST00000468844 OR1L6Q8NGR2 347 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms