RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 WDR12Q9GZL7 423 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 C21orf62Q9NYP8 219 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 S4R3C0 116 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 K7EIM0 57 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 PLA2G10O15496 165 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 OR2C1O95371 312 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 SLC25A6P12236 298 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 BTCP35070 178 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 PPP1R1AQ13522 171 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 ZNF846Q147U1 533 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 PLET1Q6UQ28 207 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 SCARB1Q8WTV0 552 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 TXN2Q99757 166 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 PRR13Q9NZ81 148 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 TMED3Q9Y3Q3 217 aa11.3□□□□□ -0.6
TMEM39A-205ENST00000468676 I3L2K1 104 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 TGOLN2O43493 480 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 GPR183P32249 361 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 HTR2BP41595 481 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 MFAP4P55083 255 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 ANKRD55Q3KP44 614 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 IL34Q6ZMJ4 242 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 HEYLQ9NQ87 328 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 ZNF256Q9Y2P7 627 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-205ENST00000468676 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 CEBPZOSA8MTT3 80 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 IGLV1-51P01701 117 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 HLA-AP01891 365 aaKnown RBP11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 CSN3P07498 182 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 BSXQ3C1V8 233 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 MZT2BQ6NZ67 158 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 NOXA1Q86UR1 476 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 FLVCR2Q9UPI3 526 aa11.28□□□□□ -0.6
TMEM39A-205ENST00000468676 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 OR2T8A6NH00 312 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 K7EIL1 84 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 MT-CO2P00403 227 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 OR4E1P0C645 316 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 RNASE2P10153 161 aaKnown RBP11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 ATP5IP56385 69 aaPredicted RBP11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 C4orf46Q504U0 113 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 Q56UQ5 140 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 LYG2Q86SG7 212 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 OR1S1Q8NH92 325 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 PINX1Q96BK5 328 aaKnown RBP11.27□□□□□ -0.61
TMEM39A-205ENST00000468676 IGHV3-21A0A0B4J1V1 117 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 A8MWP6 167 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 NUPL2O15504 423 aaKnown RBP11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 LY86O95711 162 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 TCRBP04435 133 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 NPBWR1P48145 328 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 DHRS2Q13268 280 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 C2orf83Q53S99 150 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 UBAC2Q8NBM4 344 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 DUSP18Q8NEJ0 188 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 ZNF436Q9C0F3 470 aaPredicted RBP11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 UFC1Q9Y3C8 167 aa11.26□□□□□ -0.61
TMEM39A-205ENST00000468676 RPS10-NUDT3A0A1W2PQS6 291 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 NDUFA4O00483 81 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 PITX3O75364 302 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 MED6O75586 246 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 UPK1BO75841 260 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 IFNA21P01568 189 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 CTSGP08311 255 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 SPNP16150 400 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 ANXA7P20073 488 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 ASAH1Q13510 395 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 DEFB121Q5J5C9 76 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 SLC24A4Q8NFF2 622 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 MARC2Q969Z3 335 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 PRR25Q96S07 402 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 ZC4H2Q9NQZ6 224 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 TECRQ9NZ01 308 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 U3KQ87 197 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 TGP01266 2768 aa11.25□□□□□ -0.61
TMEM39A-205ENST00000468676 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
TMEM39A-205ENST00000468676 FAM240BA0A1B0GVZ2 78 aa11.24□□□□□ -0.61
TMEM39A-205ENST00000468676 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
TMEM39A-205ENST00000468676 GNG7O60262 68 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms