RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 GNG7O60262 68 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 LYZL6O75951 148 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 SNAPC5O75971 98 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 CSN1S1P47710 185 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 COPZ1P61923 177 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 RPS25P62851 125 aaKnown RBP2.44□□□□□ -2.02
VPS50-209ENST00000467326 GNB2P62879 340 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 CCL20P78556 96 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 BSPH1Q075Z2 132 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 MSMO1Q15800 293 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 RRN3P1Q2M238 152 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 VMA21Q3ZAQ7 101 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 OCIAD2Q56VL3 154 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 C6orf52Q5T4I8 152 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 C1orf140Q5VVS0 124 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 AMTNQ6UX39 209 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 HRCT1Q6UXD1 115 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 LCA10Q71F78 164 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 SSX8Q7RTT4 187 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 TRAPPC6BQ86SZ2 158 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 GPHB5Q86YW7 130 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 PRR15Q8IV56 129 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 AMN1Q8IY45 258 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 OR51A4Q8NGJ6 313 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 OR5H6Q8NGV6 325 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 SFT2D1Q8WV19 159 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 TEX37Q96LM6 180 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 GPX7Q96SL4 187 aaPredicted RBP2.44□□□□□ -2.02
VPS50-209ENST00000467326 NRTNQ99748 197 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 TM2D3Q9BRN9 247 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 TAF9BQ9HBM6 251 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 C21orf62Q9NYP8 219 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 OR5AC2Q9NZP5 309 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 NAT8Q9UHE5 227 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 ZNF230Q9UIE0 474 aaPredicted RBP2.44□□□□□ -2.02
VPS50-209ENST00000467326 MCTS1Q9ULC4 181 aaKnown RBP2.44□□□□□ -2.02
VPS50-209ENST00000467326 VIRMAQ69YN4 1812 aaKnown RBP2.44□□□□□ -2.02
VPS50-209ENST00000467326 DISP2A7MBM2 1401 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TNS3Q68CZ2 1445 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 KIAA1107Q9UPP5 1409 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 WDR97A6NE52 1622 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 MYO5BQ9ULV0 1848 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TRAV41A0A0B4J266 112 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TMEM218A2RU14 115 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 A6NDX4 124 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TAX1BP3O14907 124 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 ZNF73O43830 326 aaPredicted RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 CST7O76096 145 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 NRASP01111 189 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 HRASP01112 189 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 KRASP01116 189 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 IGLV3-25P01717 112 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 PRM2P04554 102 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 PAEPP09466 180 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 P0DMU3 169 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 FAM231AP0DMU4 169 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 FAM231CP0DMU5 169 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 ZNF823P16415 610 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 LGALS3P17931 250 aaKnown RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 NTF3P20783 257 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 FGF7P21781 194 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 SDC2P34741 201 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 SRP14P37108 136 aaKnown RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 GUCA1AP43080 201 aaPredicted RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 RPL27AP46776 148 aaKnown RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 RAB5CP51148 216 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 CRISP3P54108 245 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TAS2R20P59543 309 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H4AP62805 103 aaKnown RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 RPL30P62888 115 aaKnown RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 EIF5AP63241 154 aaKnown RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 UBE2SQ16763 222 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 SPANXN3Q5MJ09 141 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 AADACL3Q5VUY0 350 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 LINC01551Q86U37 167 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TCTEX1D1Q8N7M0 179 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 Q8N976 141 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 Q8N9W7 124 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 OR4S1Q8NGB4 309 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 OR5A2Q8NGI9 324 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 OR2T10Q8NGZ9 312 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TMEM158Q8WZ71 300 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 MAL2Q969L2 176 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 YPEL2Q96QA6 119 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 PSMG3Q9BT73 122 aaPredicted RBP2.43□□□□□ -2.02
VPS50-209ENST00000467326 RERGLQ9H628 205 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 XAGE1AQ9HD64 81 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 SLC39A9Q9NUM3 307 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 IL36BQ9NZH7 164 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 ZNRD1Q9P1U0 126 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 SNX12Q9UMY4 172 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 FUT9Q9Y231 359 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 HS3ST2Q9Y278 367 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 TMEM14AQ9Y6G1 99 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 V9GYS6 101 aa2.43□□□□□ -2.02
VPS50-209ENST00000467326 IGHV1-3A0A0C4DH29 117 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 IGKV1-12A0A0C4DH73 117 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 A0A1B0GW64 132 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms